Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP1S1P61966 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP1S1P61966 AC093525.10-201ENST00000625130 1569 ntBASIC18.88■□□□□ 0.61
AP1S1P61966 AC034236.2-201ENST00000606662 1610 ntBASIC18.88■□□□□ 0.61
AP1S1P61966 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP1S1P61966 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP1S1P61966 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP1S1P61966 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
AP1S1P61966 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.88■□□□□ 0.61
AP1S1P61966 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
AP1S1P61966 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.87■□□□□ 0.61
AP1S1P61966 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP1S1P61966 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP1S1P61966 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP1S1P61966 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP1S1P61966 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP1S1P61966 AC120498.9-201ENST00000339021 3867 ntBASIC18.87■□□□□ 0.61
AP1S1P61966 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.87■□□□□ 0.61
AP1S1P61966 TMPOP1-202ENST00000424642 1267 ntBASIC18.87■□□□□ 0.61
AP1S1P61966 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
AP1S1P61966 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP1S1P61966 KRT18P21-201ENST00000515767 1272 ntBASIC18.87■□□□□ 0.61
AP1S1P61966 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP1S1P61966 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP1S1P61966 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP1S1P61966 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
AP1S1P61966 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP1S1P61966 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.87■□□□□ 0.61
AP1S1P61966 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP1S1P61966 Z98044.1-201ENST00000632503 1764 ntBASIC18.87■□□□□ 0.61
AP1S1P61966 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP1S1P61966 AL031432.5-201ENST00000641059 760 ntBASIC18.87■□□□□ 0.61
AP1S1P61966 AP000974.1-201ENST00000623909 2387 ntBASIC18.86■□□□□ 0.61
AP1S1P61966 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S1P61966 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.86■□□□□ 0.61
AP1S1P61966 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
AP1S1P61966 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S1P61966 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S1P61966 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S1P61966 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.86■□□□□ 0.61
AP1S1P61966 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S1P61966 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S1P61966 HOXB1-202ENST00000577092 1414 ntBASIC18.86■□□□□ 0.61
AP1S1P61966 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S1P61966 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
AP1S1P61966 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S1P61966 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S1P61966 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.86■□□□□ 0.61
AP1S1P61966 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S1P61966 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S1P61966 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S1P61966 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.86■□□□□ 0.61
AP1S1P61966 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP1S1P61966 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
AP1S1P61966 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
AP1S1P61966 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
AP1S1P61966 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.86■□□□□ 0.61
AP1S1P61966 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.86■□□□□ 0.61
AP1S1P61966 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.86■□□□□ 0.61
AP1S1P61966 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.86■□□□□ 0.61
AP1S1P61966 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
AP1S1P61966 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.86■□□□□ 0.61
AP1S1P61966 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.86■□□□□ 0.61
AP1S1P61966 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
AP1S1P61966 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.85■□□□□ 0.61
AP1S1P61966 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.85■□□□□ 0.61
AP1S1P61966 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.85■□□□□ 0.61
AP1S1P61966 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.85■□□□□ 0.61
AP1S1P61966 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.85■□□□□ 0.61
AP1S1P61966 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
AP1S1P61966 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.85■□□□□ 0.61
AP1S1P61966 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.85■□□□□ 0.61
AP1S1P61966 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.85■□□□□ 0.61
AP1S1P61966 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
AP1S1P61966 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
AP1S1P61966 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.85■□□□□ 0.61
AP1S1P61966 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
AP1S1P61966 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP1S1P61966 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.85■□□□□ 0.61
AP1S1P61966 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.85■□□□□ 0.61
AP1S1P61966 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
AP1S1P61966 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP1S1P61966 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms