Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VBP1P61758 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VBP1P61758 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
VBP1P61758 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
VBP1P61758 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.83■□□□□ 0.29
VBP1P61758 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
VBP1P61758 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
VBP1P61758 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
VBP1P61758 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
VBP1P61758 AP001330.3-201ENST00000520123 633 ntBASIC16.83■□□□□ 0.28
VBP1P61758 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 AC022211.2-201ENST00000585075 2527 ntBASIC16.83■□□□□ 0.28
VBP1P61758 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.83■□□□□ 0.28
VBP1P61758 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VBP1P61758 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.83■□□□□ 0.28
VBP1P61758 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
VBP1P61758 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.83■□□□□ 0.28
VBP1P61758 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
VBP1P61758 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VBP1P61758 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.82■□□□□ 0.28
VBP1P61758 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
VBP1P61758 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VBP1P61758 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VBP1P61758 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VBP1P61758 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VBP1P61758 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VBP1P61758 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VBP1P61758 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VBP1P61758 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VBP1P61758 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
VBP1P61758 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VBP1P61758 RASA4CP-201ENST00000424092 1398 ntBASIC16.82■□□□□ 0.28
VBP1P61758 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
VBP1P61758 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VBP1P61758 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VBP1P61758 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.82■□□□□ 0.28
VBP1P61758 AL356441.2-201ENST00000443009 864 ntBASIC16.82■□□□□ 0.28
VBP1P61758 AC023632.3-201ENST00000521633 145 ntBASIC16.82■□□□□ 0.28
VBP1P61758 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
VBP1P61758 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.82■□□□□ 0.28
VBP1P61758 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VBP1P61758 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
VBP1P61758 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
VBP1P61758 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VBP1P61758 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.82■□□□□ 0.28
VBP1P61758 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.82■□□□□ 0.28
VBP1P61758 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VBP1P61758 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
VBP1P61758 NKILA-202ENST00000614771 2598 ntBASIC16.82■□□□□ 0.28
VBP1P61758 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VBP1P61758 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.81■□□□□ 0.28
VBP1P61758 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.81■□□□□ 0.28
VBP1P61758 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.81■□□□□ 0.28
VBP1P61758 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.81■□□□□ 0.28
VBP1P61758 AC011676.5-201ENST00000624864 2660 ntBASIC16.81■□□□□ 0.28
VBP1P61758 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.81■□□□□ 0.28
VBP1P61758 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.81■□□□□ 0.28
VBP1P61758 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.81■□□□□ 0.28
VBP1P61758 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.81■□□□□ 0.28
VBP1P61758 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.81■□□□□ 0.28
VBP1P61758 AL591742.1-201ENST00000604433 565 ntBASIC16.81■□□□□ 0.28
VBP1P61758 AC105020.6-201ENST00000621523 1217 ntBASIC16.81■□□□□ 0.28
VBP1P61758 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 PP12613-201ENST00000424958 2230 ntBASIC16.81■□□□□ 0.28
VBP1P61758 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VBP1P61758 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.81■□□□□ 0.28
VBP1P61758 TFP1-202ENST00000475455 1573 ntBASIC16.81■□□□□ 0.28
VBP1P61758 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
VBP1P61758 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VBP1P61758 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.8■□□□□ 0.28
VBP1P61758 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VBP1P61758 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms