Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.57■□□□□ 0.4
RPS3AP61247 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RPS3AP61247 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
RPS3AP61247 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.57■□□□□ 0.4
RPS3AP61247 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RPS3AP61247 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.57■□□□□ 0.4
RPS3AP61247 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.57■□□□□ 0.4
RPS3AP61247 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.57■□□□□ 0.4
RPS3AP61247 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RPS3AP61247 AF186192.3-201ENST00000583427 947 ntBASIC17.57■□□□□ 0.4
RPS3AP61247 AC073195.1-201ENST00000607241 877 ntBASIC17.57■□□□□ 0.4
RPS3AP61247 AL353708.3-201ENST00000610272 989 ntBASIC17.57■□□□□ 0.4
RPS3AP61247 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.57■□□□□ 0.4
RPS3AP61247 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.57■□□□□ 0.4
RPS3AP61247 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RPS3AP61247 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RPS3AP61247 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS3AP61247 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RPS3AP61247 AC124067.4-201ENST00000519691 2379 ntBASIC17.57■□□□□ 0.4
RPS3AP61247 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.57■□□□□ 0.4
RPS3AP61247 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPS3AP61247 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPS3AP61247 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPS3AP61247 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RPS3AP61247 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.56■□□□□ 0.4
RPS3AP61247 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.56■□□□□ 0.4
RPS3AP61247 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.56■□□□□ 0.4
RPS3AP61247 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPS3AP61247 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RPS3AP61247 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.56■□□□□ 0.4
RPS3AP61247 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPS3AP61247 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPS3AP61247 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPS3AP61247 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RPS3AP61247 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.56■□□□□ 0.4
RPS3AP61247 C1QL1P1-201ENST00000568105 661 ntBASIC17.56■□□□□ 0.4
RPS3AP61247 MIR4497-201ENST00000583208 89 ntBASIC17.56■□□□□ 0.4
RPS3AP61247 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.56■□□□□ 0.4
RPS3AP61247 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.56■□□□□ 0.4
RPS3AP61247 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPS3AP61247 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.56■□□□□ 0.4
RPS3AP61247 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPS3AP61247 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPS3AP61247 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RPS3AP61247 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPS3AP61247 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPS3AP61247 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RPS3AP61247 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
RPS3AP61247 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 KRT17P2-201ENST00000300992 1314 ntBASIC17.55■□□□□ 0.4
RPS3AP61247 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RPS3AP61247 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RPS3AP61247 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.55■□□□□ 0.4
RPS3AP61247 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.55■□□□□ 0.4
RPS3AP61247 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RPS3AP61247 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.55■□□□□ 0.4
RPS3AP61247 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RPS3AP61247 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
RPS3AP61247 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RPS3AP61247 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RPS3AP61247 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPS3AP61247 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPS3AP61247 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPS3AP61247 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.54■□□□□ 0.4
RPS3AP61247 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPS3AP61247 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
RPS3AP61247 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RPS3AP61247 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms