Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERVFC1P60507 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERVFC1P60507 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.72■□□□□ 0.75
ERVFC1P60507 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERVFC1P60507 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.72■□□□□ 0.75
ERVFC1P60507 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.72■□□□□ 0.75
ERVFC1P60507 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERVFC1P60507 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ERVFC1P60507 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERVFC1P60507 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERVFC1P60507 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERVFC1P60507 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERVFC1P60507 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ERVFC1P60507 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERVFC1P60507 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.72■□□□□ 0.75
ERVFC1P60507 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.72■□□□□ 0.75
ERVFC1P60507 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.72■□□□□ 0.75
ERVFC1P60507 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.72■□□□□ 0.75
ERVFC1P60507 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.72■□□□□ 0.75
ERVFC1P60507 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.72■□□□□ 0.75
ERVFC1P60507 AP005901.3-202ENST00000581653 237 ntBASIC19.72■□□□□ 0.75
ERVFC1P60507 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.72■□□□□ 0.75
ERVFC1P60507 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
ERVFC1P60507 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.72■□□□□ 0.75
ERVFC1P60507 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.72■□□□□ 0.75
ERVFC1P60507 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.72■□□□□ 0.75
ERVFC1P60507 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERVFC1P60507 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.71■□□□□ 0.75
ERVFC1P60507 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.71■□□□□ 0.75
ERVFC1P60507 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.71■□□□□ 0.75
ERVFC1P60507 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
ERVFC1P60507 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 AC091607.1-201ENST00000490318 1060 ntBASIC19.71■□□□□ 0.75
ERVFC1P60507 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.71■□□□□ 0.75
ERVFC1P60507 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.71■□□□□ 0.75
ERVFC1P60507 AC024563.2-201ENST00000603282 481 ntBASIC19.71■□□□□ 0.75
ERVFC1P60507 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ERVFC1P60507 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.71■□□□□ 0.75
ERVFC1P60507 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERVFC1P60507 FEM1AP3-201ENST00000403722 1741 ntBASIC19.71■□□□□ 0.75
ERVFC1P60507 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERVFC1P60507 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.7■□□□□ 0.74
ERVFC1P60507 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.7■□□□□ 0.74
ERVFC1P60507 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERVFC1P60507 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.7■□□□□ 0.74
ERVFC1P60507 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERVFC1P60507 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.7■□□□□ 0.74
ERVFC1P60507 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERVFC1P60507 TSPY12P-201ENST00000421279 868 ntBASIC19.7■□□□□ 0.74
ERVFC1P60507 GUSBP12-201ENST00000513727 720 ntBASIC19.7■□□□□ 0.74
ERVFC1P60507 MIR3180-4-201ENST00000582223 153 ntBASIC19.7■□□□□ 0.74
ERVFC1P60507 AL671883.3-201ENST00000603274 991 ntBASIC19.7■□□□□ 0.74
ERVFC1P60507 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.7■□□□□ 0.74
ERVFC1P60507 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERVFC1P60507 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.7■□□□□ 0.74
ERVFC1P60507 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ERVFC1P60507 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERVFC1P60507 NSUN5P1-202ENST00000421140 1535 ntBASIC19.7■□□□□ 0.74
ERVFC1P60507 NSUN5P2-203ENST00000457352 1529 ntBASIC19.7■□□□□ 0.74
ERVFC1P60507 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERVFC1P60507 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.7■□□□□ 0.74
ERVFC1P60507 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERVFC1P60507 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
ERVFC1P60507 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.7■□□□□ 0.74
ERVFC1P60507 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERVFC1P60507 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ERVFC1P60507 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERVFC1P60507 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERVFC1P60507 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERVFC1P60507 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERVFC1P60507 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ERVFC1P60507 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERVFC1P60507 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ERVFC1P60507 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.69■□□□□ 0.74
ERVFC1P60507 AF238378.1-201ENST00000526806 358 ntBASIC19.69■□□□□ 0.74
ERVFC1P60507 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ERVFC1P60507 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ERVFC1P60507 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERVFC1P60507 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.69■□□□□ 0.74
ERVFC1P60507 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ERVFC1P60507 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.69■□□□□ 0.74
ERVFC1P60507 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.69■□□□□ 0.74
ERVFC1P60507 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ERVFC1P60507 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERVFC1P60507 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.69■□□□□ 0.74
ERVFC1P60507 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms