Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH13P55290 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.36■□□□□ 0.53
CDH13P55290 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.36■□□□□ 0.53
CDH13P55290 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.36■□□□□ 0.53
CDH13P55290 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH13P55290 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.36■□□□□ 0.53
CDH13P55290 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CDH13P55290 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH13P55290 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH13P55290 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CDH13P55290 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH13P55290 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH13P55290 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH13P55290 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH13P55290 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH13P55290 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH13P55290 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CDH13P55290 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH13P55290 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH13P55290 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH13P55290 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH13P55290 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH13P55290 MTMR9LP-203ENST00000426597 1545 ntBASIC18.35■□□□□ 0.53
CDH13P55290 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH13P55290 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH13P55290 HTR7P1-201ENST00000538670 1336 ntBASIC18.35■□□□□ 0.53
CDH13P55290 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH13P55290 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH13P55290 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH13P55290 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH13P55290 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDH13P55290 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH13P55290 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH13P55290 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH13P55290 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.35■□□□□ 0.53
CDH13P55290 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH13P55290 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.35■□□□□ 0.53
CDH13P55290 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH13P55290 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDH13P55290 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH13P55290 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH13P55290 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH13P55290 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH13P55290 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH13P55290 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDH13P55290 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH13P55290 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH13P55290 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CDH13P55290 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH13P55290 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH13P55290 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.34■□□□□ 0.53
CDH13P55290 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 AC128676.1-201ENST00000454392 318 ntBASIC18.34■□□□□ 0.53
CDH13P55290 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CDH13P55290 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CDH13P55290 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH13P55290 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.34■□□□□ 0.53
CDH13P55290 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CDH13P55290 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.34■□□□□ 0.53
CDH13P55290 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH13P55290 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH13P55290 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH13P55290 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.33■□□□□ 0.53
CDH13P55290 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
CDH13P55290 AC079598.2-202ENST00000546624 1451 ntBASIC18.33■□□□□ 0.53
CDH13P55290 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.33■□□□□ 0.53
CDH13P55290 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.33■□□□□ 0.53
CDH13P55290 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH13P55290 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH13P55290 AC073592.3-201ENST00000625118 1834 ntBASIC18.33■□□□□ 0.53
CDH13P55290 HCG11-201ENST00000411553 5696 ntBASIC18.33■□□□□ 0.53
CDH13P55290 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH13P55290 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CDH13P55290 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH13P55290 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH13P55290 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.33■□□□□ 0.52
CDH13P55290 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH13P55290 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.33■□□□□ 0.52
CDH13P55290 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.33■□□□□ 0.52
CDH13P55290 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CDH13P55290 AC091390.4-202ENST00000476426 537 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms