Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCNKAP51800 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CLCNKAP51800 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCNKAP51800 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLCNKAP51800 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLCNKAP51800 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CLCNKAP51800 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLCNKAP51800 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCNKAP51800 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CLCNKAP51800 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCNKAP51800 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLCNKAP51800 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CLCNKAP51800 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCNKAP51800 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCNKAP51800 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCNKAP51800 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.37■□□□□ 0.53
CLCNKAP51800 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLCNKAP51800 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCNKAP51800 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCNKAP51800 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CLCNKAP51800 AL023973.1-201ENST00000624619 620 ntBASIC18.37■□□□□ 0.53
CLCNKAP51800 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CLCNKAP51800 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCNKAP51800 AC036111.1-201ENST00000533973 1582 ntBASIC18.37■□□□□ 0.53
CLCNKAP51800 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLCNKAP51800 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCNKAP51800 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCNKAP51800 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCNKAP51800 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CLCNKAP51800 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCNKAP51800 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCNKAP51800 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCNKAP51800 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLCNKAP51800 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLCNKAP51800 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.36■□□□□ 0.53
CLCNKAP51800 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCNKAP51800 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLCNKAP51800 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.36■□□□□ 0.53
CLCNKAP51800 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.36■□□□□ 0.53
CLCNKAP51800 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.36■□□□□ 0.53
CLCNKAP51800 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLCNKAP51800 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.36■□□□□ 0.53
CLCNKAP51800 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.36■□□□□ 0.53
CLCNKAP51800 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.36■□□□□ 0.53
CLCNKAP51800 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLCNKAP51800 NTF6B-201ENST00000591913 560 ntBASIC18.36■□□□□ 0.53
CLCNKAP51800 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.36■□□□□ 0.53
CLCNKAP51800 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLCNKAP51800 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CLCNKAP51800 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.36■□□□□ 0.53
CLCNKAP51800 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.36■□□□□ 0.53
CLCNKAP51800 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.36■□□□□ 0.53
CLCNKAP51800 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCNKAP51800 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCNKAP51800 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.36■□□□□ 0.53
CLCNKAP51800 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CLCNKAP51800 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCNKAP51800 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCNKAP51800 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CLCNKAP51800 KRT8P7-201ENST00000533003 1432 ntBASIC18.35■□□□□ 0.53
CLCNKAP51800 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.35■□□□□ 0.53
CLCNKAP51800 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLCNKAP51800 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCNKAP51800 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.35■□□□□ 0.53
CLCNKAP51800 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.35■□□□□ 0.53
CLCNKAP51800 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.35■□□□□ 0.53
CLCNKAP51800 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.35■□□□□ 0.53
CLCNKAP51800 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCNKAP51800 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.35■□□□□ 0.53
CLCNKAP51800 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCNKAP51800 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.35■□□□□ 0.53
CLCNKAP51800 MYC-208ENST00000641036 567 ntBASIC18.35■□□□□ 0.53
CLCNKAP51800 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CLCNKAP51800 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCNKAP51800 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.35■□□□□ 0.53
CLCNKAP51800 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCNKAP51800 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms