Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
VEGFBP49765 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.54■■□□□ 1.04
VEGFBP49765 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.54■■□□□ 1.04
VEGFBP49765 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.54■■□□□ 1.04
VEGFBP49765 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
VEGFBP49765 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VEGFBP49765 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.53■■□□□ 1.04
VEGFBP49765 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VEGFBP49765 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.53■■□□□ 1.04
VEGFBP49765 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.53■■□□□ 1.04
VEGFBP49765 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
VEGFBP49765 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VEGFBP49765 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
VEGFBP49765 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
VEGFBP49765 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VEGFBP49765 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
VEGFBP49765 ALG1L5P-201ENST00000482043 771 ntBASIC21.53■■□□□ 1.04
VEGFBP49765 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.53■■□□□ 1.04
VEGFBP49765 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VEGFBP49765 MIR3180-4-201ENST00000582223 153 ntBASIC21.53■■□□□ 1.04
VEGFBP49765 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.53■■□□□ 1.04
VEGFBP49765 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VEGFBP49765 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.53■■□□□ 1.04
VEGFBP49765 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VEGFBP49765 AP005212.1-201ENST00000581547 1997 ntBASIC21.53■■□□□ 1.04
VEGFBP49765 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VEGFBP49765 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.53■■□□□ 1.04
VEGFBP49765 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VEGFBP49765 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.53■■□□□ 1.04
VEGFBP49765 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VEGFBP49765 AC233723.2-201ENST00000623798 2106 ntBASIC21.53■■□□□ 1.04
VEGFBP49765 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VEGFBP49765 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
VEGFBP49765 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
VEGFBP49765 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VEGFBP49765 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VEGFBP49765 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VEGFBP49765 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VEGFBP49765 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VEGFBP49765 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VEGFBP49765 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.52■■□□□ 1.04
VEGFBP49765 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.52■■□□□ 1.04
VEGFBP49765 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VEGFBP49765 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
VEGFBP49765 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.52■■□□□ 1.04
VEGFBP49765 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.52■■□□□ 1.04
VEGFBP49765 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.52■■□□□ 1.04
VEGFBP49765 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.52■■□□□ 1.04
VEGFBP49765 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.52■■□□□ 1.04
VEGFBP49765 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VEGFBP49765 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.52■■□□□ 1.04
VEGFBP49765 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.52■■□□□ 1.04
VEGFBP49765 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.52■■□□□ 1.04
VEGFBP49765 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.52■■□□□ 1.04
VEGFBP49765 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
VEGFBP49765 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VEGFBP49765 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
VEGFBP49765 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VEGFBP49765 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VEGFBP49765 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VEGFBP49765 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.51■■□□□ 1.03
VEGFBP49765 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VEGFBP49765 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.51■■□□□ 1.03
VEGFBP49765 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.51■■□□□ 1.03
VEGFBP49765 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.51■■□□□ 1.03
VEGFBP49765 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.51■■□□□ 1.03
VEGFBP49765 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.51■■□□□ 1.03
VEGFBP49765 AC138761.1-201ENST00000584393 385 ntBASIC21.51■■□□□ 1.03
VEGFBP49765 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.51■■□□□ 1.03
VEGFBP49765 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.51■■□□□ 1.03
VEGFBP49765 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.51■■□□□ 1.03
VEGFBP49765 FBXW4P1-201ENST00000426721 2239 ntBASIC21.51■■□□□ 1.03
VEGFBP49765 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VEGFBP49765 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VEGFBP49765 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
VEGFBP49765 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VEGFBP49765 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VEGFBP49765 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VEGFBP49765 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VEGFBP49765 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VEGFBP49765 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VEGFBP49765 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.5■■□□□ 1.03
VEGFBP49765 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VEGFBP49765 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.5■■□□□ 1.03
VEGFBP49765 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.5■■□□□ 1.03
VEGFBP49765 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.5■■□□□ 1.03
VEGFBP49765 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.5■■□□□ 1.03
VEGFBP49765 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.5■■□□□ 1.03
VEGFBP49765 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
VEGFBP49765 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.5■■□□□ 1.03
VEGFBP49765 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.5■■□□□ 1.03
VEGFBP49765 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VEGFBP49765 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VEGFBP49765 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.5■■□□□ 1.03
VEGFBP49765 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.5■■□□□ 1.03
VEGFBP49765 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.5■■□□□ 1.03
VEGFBP49765 AC064836.3-201ENST00000607928 673 ntBASIC21.5■■□□□ 1.03
VEGFBP49765 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VEGFBP49765 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VEGFBP49765 AL356309.3-201ENST00000624132 1934 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms