Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ARCN1P48444 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ARCN1P48444 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
ARCN1P48444 AC126763.1-201ENST00000552015 2118 ntBASIC18.79■□□□□ 0.6
ARCN1P48444 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARCN1P48444 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ARCN1P48444 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARCN1P48444 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARCN1P48444 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ARCN1P48444 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.79■□□□□ 0.6
ARCN1P48444 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARCN1P48444 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.79■□□□□ 0.6
ARCN1P48444 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARCN1P48444 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
ARCN1P48444 BX088651.1-201ENST00000540551 451 ntBASIC18.79■□□□□ 0.6
ARCN1P48444 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.79■□□□□ 0.6
ARCN1P48444 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.79■□□□□ 0.6
ARCN1P48444 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.79■□□□□ 0.6
ARCN1P48444 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.79■□□□□ 0.6
ARCN1P48444 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARCN1P48444 AC135050.7-201ENST00000624508 2218 ntBASIC18.79■□□□□ 0.6
ARCN1P48444 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.79■□□□□ 0.6
ARCN1P48444 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARCN1P48444 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARCN1P48444 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.79■□□□□ 0.6
ARCN1P48444 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARCN1P48444 AC073592.3-201ENST00000625118 1834 ntBASIC18.79■□□□□ 0.6
ARCN1P48444 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ARCN1P48444 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ARCN1P48444 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARCN1P48444 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARCN1P48444 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ARCN1P48444 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARCN1P48444 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARCN1P48444 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.78■□□□□ 0.6
ARCN1P48444 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARCN1P48444 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ARCN1P48444 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.78■□□□□ 0.6
ARCN1P48444 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ARCN1P48444 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARCN1P48444 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.78■□□□□ 0.6
ARCN1P48444 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARCN1P48444 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ARCN1P48444 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARCN1P48444 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.78■□□□□ 0.6
ARCN1P48444 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARCN1P48444 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.78■□□□□ 0.6
ARCN1P48444 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
ARCN1P48444 BICD1-207ENST00000551848 1962 ntBASIC18.78■□□□□ 0.6
ARCN1P48444 AL357033.4-201ENST00000617703 1807 ntBASIC18.78■□□□□ 0.6
ARCN1P48444 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARCN1P48444 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ARCN1P48444 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.78■□□□□ 0.6
ARCN1P48444 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.78■□□□□ 0.6
ARCN1P48444 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARCN1P48444 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
ARCN1P48444 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARCN1P48444 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ARCN1P48444 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.77■□□□□ 0.6
ARCN1P48444 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ARCN1P48444 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.77■□□□□ 0.6
ARCN1P48444 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.77■□□□□ 0.6
ARCN1P48444 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.77■□□□□ 0.6
ARCN1P48444 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.77■□□□□ 0.6
ARCN1P48444 AC008622.2-201ENST00000617006 1229 ntBASIC18.77■□□□□ 0.6
ARCN1P48444 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
ARCN1P48444 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.77■□□□□ 0.6
ARCN1P48444 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.77■□□□□ 0.6
ARCN1P48444 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ARCN1P48444 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ARCN1P48444 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARCN1P48444 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
ARCN1P48444 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.77■□□□□ 0.59
ARCN1P48444 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
ARCN1P48444 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
ARCN1P48444 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
ARCN1P48444 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
ARCN1P48444 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARCN1P48444 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARCN1P48444 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.76■□□□□ 0.59
ARCN1P48444 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.76■□□□□ 0.59
ARCN1P48444 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.76■□□□□ 0.59
ARCN1P48444 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARCN1P48444 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms