Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC1A1P43005 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC1A1P43005 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC1A1P43005 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC1A1P43005 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC1A1P43005 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.65■□□□□ 0.74
SLC1A1P43005 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC1A1P43005 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC1A1P43005 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC1A1P43005 KRT8P45-201ENST00000414328 1447 ntBASIC19.65■□□□□ 0.74
SLC1A1P43005 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC1A1P43005 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC1A1P43005 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC1A1P43005 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC1A1P43005 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC1A1P43005 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC1A1P43005 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SLC1A1P43005 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC1A1P43005 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC1A1P43005 ABALON-201ENST00000629058 1903 ntBASIC19.64■□□□□ 0.74
SLC1A1P43005 AL499627.1-201ENST00000569373 2188 ntBASIC19.64■□□□□ 0.74
SLC1A1P43005 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC1A1P43005 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.64■□□□□ 0.73
SLC1A1P43005 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC1A1P43005 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC1A1P43005 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SLC1A1P43005 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC1A1P43005 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC1A1P43005 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC1A1P43005 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC1A1P43005 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SLC1A1P43005 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SLC1A1P43005 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SLC1A1P43005 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC1A1P43005 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC1A1P43005 B3GAT3P1-201ENST00000471720 806 ntBASIC19.64■□□□□ 0.73
SLC1A1P43005 AC011506.1-201ENST00000474329 610 ntBASIC19.64■□□□□ 0.73
SLC1A1P43005 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC1A1P43005 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC1A1P43005 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC1A1P43005 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC1A1P43005 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC1A1P43005 MIR6786-201ENST00000616843 113 ntBASIC19.64■□□□□ 0.73
SLC1A1P43005 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC1A1P43005 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC1A1P43005 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC1A1P43005 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC1A1P43005 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC1A1P43005 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC1A1P43005 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SLC1A1P43005 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC1A1P43005 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC1A1P43005 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC1A1P43005 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC1A1P43005 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC1A1P43005 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC1A1P43005 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
SLC1A1P43005 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SLC1A1P43005 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC1A1P43005 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 RCC2P3-201ENST00000418112 1537 ntBASIC19.63■□□□□ 0.73
SLC1A1P43005 FSCN1P1-201ENST00000568912 1481 ntBASIC19.63■□□□□ 0.73
SLC1A1P43005 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC1A1P43005 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SLC1A1P43005 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SLC1A1P43005 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.63■□□□□ 0.73
SLC1A1P43005 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.63■□□□□ 0.73
SLC1A1P43005 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SLC1A1P43005 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SLC1A1P43005 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC1A1P43005 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC1A1P43005 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SLC1A1P43005 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC1A1P43005 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC1A1P43005 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC1A1P43005 AL135905.2-201ENST00000584934 1404 ntBASIC19.62■□□□□ 0.73
SLC1A1P43005 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
SLC1A1P43005 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.62■□□□□ 0.73
SLC1A1P43005 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.62■□□□□ 0.73
SLC1A1P43005 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC1A1P43005 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
SLC1A1P43005 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC1A1P43005 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC1A1P43005 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.62■□□□□ 0.73
SLC1A1P43005 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms