Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
GDNFP39905 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.33■□□□□ 0.2
GDNFP39905 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.33■□□□□ 0.2
GDNFP39905 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.33■□□□□ 0.2
GDNFP39905 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.33■□□□□ 0.2
GDNFP39905 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
GDNFP39905 AC083906.6-201ENST00000641366 219 ntBASIC16.33■□□□□ 0.2
GDNFP39905 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDNFP39905 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.33■□□□□ 0.2
GDNFP39905 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDNFP39905 AC116351.2-201ENST00000606540 1585 ntBASIC16.33■□□□□ 0.2
GDNFP39905 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
GDNFP39905 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
GDNFP39905 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.33■□□□□ 0.2
GDNFP39905 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDNFP39905 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GDNFP39905 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
GDNFP39905 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GDNFP39905 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.33■□□□□ 0.2
GDNFP39905 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDNFP39905 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
GDNFP39905 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
GDNFP39905 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.32■□□□□ 0.2
GDNFP39905 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
GDNFP39905 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.32■□□□□ 0.2
GDNFP39905 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.32■□□□□ 0.2
GDNFP39905 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.32■□□□□ 0.2
GDNFP39905 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.32■□□□□ 0.2
GDNFP39905 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.32■□□□□ 0.2
GDNFP39905 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.32■□□□□ 0.2
GDNFP39905 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.32■□□□□ 0.2
GDNFP39905 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 PNMA6B-201ENST00000538162 1200 ntBASIC16.32■□□□□ 0.2
GDNFP39905 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.32■□□□□ 0.2
GDNFP39905 AC099398.1-201ENST00000567919 2776 ntBASIC16.32■□□□□ 0.2
GDNFP39905 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.32■□□□□ 0.2
GDNFP39905 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 AC124283.5-201ENST00000624661 1809 ntBASIC16.32■□□□□ 0.2
GDNFP39905 HLA-B-256ENST00000639848 1089 ntBASIC16.32■□□□□ 0.2
GDNFP39905 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDNFP39905 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 LINC00896-202ENST00000609602 2128 ntBASIC16.31■□□□□ 0.2
GDNFP39905 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.31■□□□□ 0.2
GDNFP39905 AC104417.2-201ENST00000562989 1793 ntBASIC16.31■□□□□ 0.2
GDNFP39905 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.31■□□□□ 0.2
GDNFP39905 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.31■□□□□ 0.2
GDNFP39905 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.31■□□□□ 0.2
GDNFP39905 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.31■□□□□ 0.2
GDNFP39905 AC060766.5-201ENST00000590539 871 ntBASIC16.31■□□□□ 0.2
GDNFP39905 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
GDNFP39905 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
GDNFP39905 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 AC126763.1-201ENST00000552015 2118 ntBASIC16.31■□□□□ 0.2
GDNFP39905 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
GDNFP39905 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
GDNFP39905 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.31■□□□□ 0.2
GDNFP39905 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GDNFP39905 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
GDNFP39905 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDNFP39905 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
GDNFP39905 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDNFP39905 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GDNFP39905 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDNFP39905 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GDNFP39905 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GDNFP39905 AC009053.2-201ENST00000563701 2365 ntBASIC16.3■□□□□ 0.2
GDNFP39905 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.3■□□□□ 0.2
GDNFP39905 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.3■□□□□ 0.2
GDNFP39905 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms