Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL15A1P39059 AL390719.2-201ENST00000606993 987 ntBASIC23.77■■□□□ 1.4
COL15A1P39059 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.77■■□□□ 1.4
COL15A1P39059 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL15A1P39059 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.39
COL15A1P39059 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
COL15A1P39059 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.39
COL15A1P39059 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.76■■□□□ 1.39
COL15A1P39059 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
COL15A1P39059 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL15A1P39059 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL15A1P39059 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL15A1P39059 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.76■■□□□ 1.39
COL15A1P39059 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL15A1P39059 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
COL15A1P39059 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.76■■□□□ 1.39
COL15A1P39059 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
COL15A1P39059 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.76■■□□□ 1.39
COL15A1P39059 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL15A1P39059 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL15A1P39059 AC091304.2-201ENST00000564639 760 ntBASIC23.76■■□□□ 1.39
COL15A1P39059 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC23.76■■□□□ 1.39
COL15A1P39059 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL15A1P39059 AC141586.3-201ENST00000562166 1838 ntBASIC23.76■■□□□ 1.39
COL15A1P39059 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
COL15A1P39059 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL15A1P39059 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.75■■□□□ 1.39
COL15A1P39059 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL15A1P39059 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.75■■□□□ 1.39
COL15A1P39059 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL15A1P39059 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL15A1P39059 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL15A1P39059 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.75■■□□□ 1.39
COL15A1P39059 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
COL15A1P39059 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.75■■□□□ 1.39
COL15A1P39059 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.75■■□□□ 1.39
COL15A1P39059 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC23.75■■□□□ 1.39
COL15A1P39059 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.75■■□□□ 1.39
COL15A1P39059 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL15A1P39059 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL15A1P39059 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.74■■□□□ 1.39
COL15A1P39059 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.74■■□□□ 1.39
COL15A1P39059 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL15A1P39059 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
COL15A1P39059 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL15A1P39059 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
COL15A1P39059 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
COL15A1P39059 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL15A1P39059 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL15A1P39059 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
COL15A1P39059 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.74■■□□□ 1.39
COL15A1P39059 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
COL15A1P39059 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.74■■□□□ 1.39
COL15A1P39059 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL15A1P39059 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC23.74■■□□□ 1.39
COL15A1P39059 AL160237.2-201ENST00000556165 472 ntBASIC23.74■■□□□ 1.39
COL15A1P39059 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL15A1P39059 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC23.74■■□□□ 1.39
COL15A1P39059 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL15A1P39059 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.74■■□□□ 1.39
COL15A1P39059 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.74■■□□□ 1.39
COL15A1P39059 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL15A1P39059 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL15A1P39059 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
COL15A1P39059 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.74■■□□□ 1.39
COL15A1P39059 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL15A1P39059 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL15A1P39059 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.73■■□□□ 1.39
COL15A1P39059 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC23.73■■□□□ 1.39
COL15A1P39059 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.73■■□□□ 1.39
COL15A1P39059 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
COL15A1P39059 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
COL15A1P39059 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL15A1P39059 AC104819.1-201ENST00000504587 486 ntBASIC23.73■■□□□ 1.39
COL15A1P39059 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.73■■□□□ 1.39
COL15A1P39059 AC005332.3-201ENST00000589904 676 ntBASIC23.73■■□□□ 1.39
COL15A1P39059 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
COL15A1P39059 AC138894.3-201ENST00000603787 634 ntBASIC23.73■■□□□ 1.39
COL15A1P39059 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL15A1P39059 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL15A1P39059 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
COL15A1P39059 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL15A1P39059 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL15A1P39059 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.73■■□□□ 1.39
COL15A1P39059 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
COL15A1P39059 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.73■■□□□ 1.39
COL15A1P39059 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL15A1P39059 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL15A1P39059 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL15A1P39059 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL15A1P39059 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.73■■□□□ 1.39
COL15A1P39059 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL15A1P39059 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC23.72■■□□□ 1.39
COL15A1P39059 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
COL15A1P39059 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.72■■□□□ 1.39
COL15A1P39059 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL15A1P39059 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.72■■□□□ 1.39
COL15A1P39059 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL15A1P39059 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL15A1P39059 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms