Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT9P35527 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT9P35527 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT9P35527 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KRT9P35527 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT9P35527 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
KRT9P35527 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT9P35527 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT9P35527 ABALON-201ENST00000629058 1903 ntBASIC20.53■□□□□ 0.88
KRT9P35527 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT9P35527 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT9P35527 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT9P35527 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT9P35527 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT9P35527 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT9P35527 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT9P35527 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT9P35527 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.53■□□□□ 0.88
KRT9P35527 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
KRT9P35527 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
KRT9P35527 ITM2C-210ENST00000620962 501 ntBASIC20.53■□□□□ 0.88
KRT9P35527 HLA-A-209ENST00000638375 975 ntBASIC20.53■□□□□ 0.88
KRT9P35527 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT9P35527 AC068880.1-201ENST00000507289 2297 ntBASIC20.53■□□□□ 0.88
KRT9P35527 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT9P35527 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT9P35527 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT9P35527 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT9P35527 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT9P35527 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT9P35527 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT9P35527 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.52■□□□□ 0.88
KRT9P35527 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT9P35527 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
KRT9P35527 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
KRT9P35527 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT9P35527 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT9P35527 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT9P35527 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT9P35527 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT9P35527 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT9P35527 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT9P35527 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT9P35527 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT9P35527 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT9P35527 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT9P35527 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.52■□□□□ 0.88
KRT9P35527 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT9P35527 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT9P35527 RPPH1-201ENST00000516869 333 ntBASIC20.52■□□□□ 0.88
KRT9P35527 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT9P35527 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT9P35527 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT9P35527 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
KRT9P35527 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
KRT9P35527 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
KRT9P35527 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
KRT9P35527 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KRT9P35527 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT9P35527 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT9P35527 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.51■□□□□ 0.87
KRT9P35527 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.51■□□□□ 0.87
KRT9P35527 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
KRT9P35527 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.51■□□□□ 0.87
KRT9P35527 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.51■□□□□ 0.87
KRT9P35527 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.51■□□□□ 0.87
KRT9P35527 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KRT9P35527 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
KRT9P35527 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.51■□□□□ 0.87
KRT9P35527 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.51■□□□□ 0.87
KRT9P35527 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.51■□□□□ 0.87
KRT9P35527 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT9P35527 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT9P35527 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
KRT9P35527 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KRT9P35527 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.51■□□□□ 0.87
KRT9P35527 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.51■□□□□ 0.87
KRT9P35527 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.51■□□□□ 0.87
KRT9P35527 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.51■□□□□ 0.87
KRT9P35527 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT9P35527 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.5■□□□□ 0.87
KRT9P35527 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT9P35527 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT9P35527 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT9P35527 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.5■□□□□ 0.87
KRT9P35527 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT9P35527 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.5■□□□□ 0.87
KRT9P35527 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.5■□□□□ 0.87
KRT9P35527 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.5■□□□□ 0.87
KRT9P35527 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
KRT9P35527 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT9P35527 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
KRT9P35527 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
KRT9P35527 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.5■□□□□ 0.87
KRT9P35527 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
KRT9P35527 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
KRT9P35527 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
KRT9P35527 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT9P35527 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT9P35527 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms