Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPA1P20036 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPA1P20036 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
HLA-DPA1P20036 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPA1P20036 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPA1P20036 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DPA1P20036 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPA1P20036 AL109659.2-201ENST00000606809 1674 ntBASIC18.93■□□□□ 0.62
HLA-DPA1P20036 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPA1P20036 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DPA1P20036 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPA1P20036 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPA1P20036 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DPA1P20036 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPA1P20036 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DPA1P20036 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.92■□□□□ 0.62
HLA-DPA1P20036 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 ANO7L1-203ENST00000602586 1720 ntBASIC18.92■□□□□ 0.62
HLA-DPA1P20036 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 C2orf69P3-201ENST00000565542 1120 ntBASIC18.92■□□□□ 0.62
HLA-DPA1P20036 AL023803.3-201ENST00000615559 522 ntBASIC18.92■□□□□ 0.62
HLA-DPA1P20036 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 AC090340.1-201ENST00000620778 4980 ntBASIC18.92■□□□□ 0.62
HLA-DPA1P20036 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DPA1P20036 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 CCR12P-201ENST00000446203 998 ntBASIC18.91■□□□□ 0.62
HLA-DPA1P20036 TSPY17P-201ENST00000450329 467 ntBASIC18.91■□□□□ 0.62
HLA-DPA1P20036 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.91■□□□□ 0.62
HLA-DPA1P20036 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HLA-DPA1P20036 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.9■□□□□ 0.62
HLA-DPA1P20036 AL023284.2-201ENST00000405850 579 ntBASIC18.9■□□□□ 0.62
HLA-DPA1P20036 MCCD1P1-208ENST00000445732 328 ntBASIC18.9■□□□□ 0.62
HLA-DPA1P20036 TSPY15P-201ENST00000457163 923 ntBASIC18.9■□□□□ 0.62
HLA-DPA1P20036 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 AL353719.1-201ENST00000566847 864 ntBASIC18.9■□□□□ 0.62
HLA-DPA1P20036 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DPA1P20036 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DPA1P20036 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.89■□□□□ 0.62
HLA-DPA1P20036 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 GPAT2P1-201ENST00000444924 1672 ntBASIC18.89■□□□□ 0.61
HLA-DPA1P20036 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms