Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCLP18206 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
VCLP18206 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCLP18206 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VCLP18206 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.85■□□□□ 0.61
VCLP18206 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.85■□□□□ 0.61
VCLP18206 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.85■□□□□ 0.61
VCLP18206 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.85■□□□□ 0.61
VCLP18206 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VCLP18206 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.85■□□□□ 0.61
VCLP18206 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.85■□□□□ 0.61
VCLP18206 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCLP18206 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.85■□□□□ 0.61
VCLP18206 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.85■□□□□ 0.61
VCLP18206 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.85■□□□□ 0.61
VCLP18206 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.85■□□□□ 0.61
VCLP18206 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.85■□□□□ 0.61
VCLP18206 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCLP18206 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCLP18206 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VCLP18206 FZD10-202ENST00000539839 3282 ntBASIC18.85■□□□□ 0.61
VCLP18206 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
VCLP18206 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VCLP18206 AC018470.1-201ENST00000624790 3129 ntBASIC18.85■□□□□ 0.61
VCLP18206 KRT8P41-201ENST00000533985 1514 ntBASIC18.84■□□□□ 0.61
VCLP18206 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCLP18206 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCLP18206 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCLP18206 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCLP18206 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCLP18206 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.84■□□□□ 0.61
VCLP18206 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCLP18206 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VCLP18206 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCLP18206 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.84■□□□□ 0.61
VCLP18206 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.84■□□□□ 0.61
VCLP18206 C2orf69P3-201ENST00000565542 1120 ntBASIC18.84■□□□□ 0.61
VCLP18206 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.84■□□□□ 0.61
VCLP18206 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.84■□□□□ 0.61
VCLP18206 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCLP18206 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCLP18206 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.84■□□□□ 0.61
VCLP18206 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCLP18206 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCLP18206 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.84■□□□□ 0.61
VCLP18206 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCLP18206 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.84■□□□□ 0.61
VCLP18206 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.84■□□□□ 0.61
VCLP18206 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCLP18206 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
VCLP18206 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VCLP18206 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.83■□□□□ 0.61
VCLP18206 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VCLP18206 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VCLP18206 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VCLP18206 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
VCLP18206 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VCLP18206 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.83■□□□□ 0.61
VCLP18206 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
VCLP18206 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCLP18206 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCLP18206 AC087499.1-201ENST00000418141 1075 ntBASIC18.83■□□□□ 0.6
VCLP18206 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.83■□□□□ 0.6
VCLP18206 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VCLP18206 TSPY21P-201ENST00000433481 731 ntBASIC18.83■□□□□ 0.6
VCLP18206 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VCLP18206 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.83■□□□□ 0.6
VCLP18206 PRSS44-201ENST00000515154 1146 ntBASIC18.83■□□□□ 0.6
VCLP18206 NAPSB-206ENST00000562112 1266 ntBASIC18.83■□□□□ 0.6
VCLP18206 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.83■□□□□ 0.6
VCLP18206 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.83■□□□□ 0.6
VCLP18206 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
VCLP18206 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.83■□□□□ 0.6
VCLP18206 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VCLP18206 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
VCLP18206 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.83■□□□□ 0.6
VCLP18206 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VCLP18206 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VCLP18206 AC096733.2-201ENST00000609937 1394 ntBASIC18.82■□□□□ 0.6
VCLP18206 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCLP18206 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCLP18206 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCLP18206 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCLP18206 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.82■□□□□ 0.6
VCLP18206 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.82■□□□□ 0.6
VCLP18206 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCLP18206 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCLP18206 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VCLP18206 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VCLP18206 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCLP18206 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCLP18206 MFAP1P1-201ENST00000442257 1255 ntBASIC18.82■□□□□ 0.6
VCLP18206 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.82■□□□□ 0.6
VCLP18206 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.82■□□□□ 0.6
VCLP18206 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.82■□□□□ 0.6
VCLP18206 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.82■□□□□ 0.6
VCLP18206 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VCLP18206 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VCLP18206 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
VCLP18206 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms