Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRKCAP17252 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.36■□□□□ 0.37
PRKCAP17252 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.35■□□□□ 0.37
PRKCAP17252 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.35■□□□□ 0.37
PRKCAP17252 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.35■□□□□ 0.37
PRKCAP17252 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PRKCAP17252 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PRKCAP17252 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PRKCAP17252 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.35■□□□□ 0.37
PRKCAP17252 TSPY7P-201ENST00000431358 1114 ntBASIC17.35■□□□□ 0.37
PRKCAP17252 AL355355.2-201ENST00000442321 338 ntBASIC17.35■□□□□ 0.37
PRKCAP17252 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 AC008040.2-201ENST00000461049 708 ntBASIC17.35■□□□□ 0.37
PRKCAP17252 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.35■□□□□ 0.37
PRKCAP17252 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.35■□□□□ 0.37
PRKCAP17252 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.35■□□□□ 0.37
PRKCAP17252 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.35■□□□□ 0.37
PRKCAP17252 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.35■□□□□ 0.37
PRKCAP17252 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.35■□□□□ 0.37
PRKCAP17252 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.35■□□□□ 0.37
PRKCAP17252 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PRKCAP17252 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PRKCAP17252 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PRKCAP17252 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PRKCAP17252 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.35■□□□□ 0.37
PRKCAP17252 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.35■□□□□ 0.37
PRKCAP17252 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PRKCAP17252 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PRKCAP17252 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
PRKCAP17252 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRKCAP17252 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRKCAP17252 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRKCAP17252 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRKCAP17252 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRKCAP17252 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PRKCAP17252 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PRKCAP17252 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRKCAP17252 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRKCAP17252 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRKCAP17252 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRKCAP17252 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRKCAP17252 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PRKCAP17252 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PRKCAP17252 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRKCAP17252 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.34■□□□□ 0.37
PRKCAP17252 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRKCAP17252 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.34■□□□□ 0.37
PRKCAP17252 IRX1P1-201ENST00000438849 1838 ntBASIC17.34■□□□□ 0.37
PRKCAP17252 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.34■□□□□ 0.37
PRKCAP17252 SNORA78-201ENST00000459373 127 ntBASIC17.34■□□□□ 0.37
PRKCAP17252 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.34■□□□□ 0.37
PRKCAP17252 AC093827.2-201ENST00000512654 315 ntBASIC17.34■□□□□ 0.37
PRKCAP17252 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.34■□□□□ 0.37
PRKCAP17252 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.34■□□□□ 0.37
PRKCAP17252 AC099398.1-201ENST00000567919 2776 ntBASIC17.34■□□□□ 0.37
PRKCAP17252 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PRKCAP17252 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.34■□□□□ 0.37
PRKCAP17252 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.34■□□□□ 0.37
PRKCAP17252 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.34■□□□□ 0.37
PRKCAP17252 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRKCAP17252 AC018470.1-201ENST00000624790 3129 ntBASIC17.34■□□□□ 0.37
PRKCAP17252 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PRKCAP17252 AC011270.2-201ENST00000624293 2550 ntBASIC17.34■□□□□ 0.37
PRKCAP17252 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PRKCAP17252 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PRKCAP17252 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PRKCAP17252 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.33■□□□□ 0.37
PRKCAP17252 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRKCAP17252 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRKCAP17252 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRKCAP17252 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.33■□□□□ 0.37
PRKCAP17252 KRT8P11-201ENST00000409686 1436 ntBASIC17.33■□□□□ 0.36
PRKCAP17252 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
PRKCAP17252 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PRKCAP17252 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRKCAP17252 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.33■□□□□ 0.36
PRKCAP17252 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.33■□□□□ 0.36
PRKCAP17252 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.33■□□□□ 0.36
PRKCAP17252 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PRKCAP17252 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.33■□□□□ 0.36
PRKCAP17252 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms