Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRAFP15056 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BRAFP15056 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.29■□□□□ 0.68
BRAFP15056 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRAFP15056 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRAFP15056 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRAFP15056 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.29■□□□□ 0.68
BRAFP15056 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BRAFP15056 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRAFP15056 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRAFP15056 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRAFP15056 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRAFP15056 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRAFP15056 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRAFP15056 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.29■□□□□ 0.68
BRAFP15056 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRAFP15056 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
BRAFP15056 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.28■□□□□ 0.68
BRAFP15056 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.28■□□□□ 0.68
BRAFP15056 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.28■□□□□ 0.68
BRAFP15056 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
BRAFP15056 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
BRAFP15056 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
BRAFP15056 AL596275.1-201ENST00000423464 877 ntBASIC19.28■□□□□ 0.68
BRAFP15056 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.28■□□□□ 0.68
BRAFP15056 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
BRAFP15056 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.28■□□□□ 0.68
BRAFP15056 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
BRAFP15056 AC104417.2-201ENST00000562989 1793 ntBASIC19.28■□□□□ 0.68
BRAFP15056 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.28■□□□□ 0.68
BRAFP15056 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
BRAFP15056 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
BRAFP15056 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
BRAFP15056 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
BRAFP15056 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRAFP15056 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.27■□□□□ 0.68
BRAFP15056 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRAFP15056 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRAFP15056 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.27■□□□□ 0.68
BRAFP15056 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRAFP15056 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
BRAFP15056 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRAFP15056 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRAFP15056 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRAFP15056 AC020916.1-201ENST00000587762 1774 ntBASIC19.27■□□□□ 0.68
BRAFP15056 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.27■□□□□ 0.68
BRAFP15056 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRAFP15056 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
BRAFP15056 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRAFP15056 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRAFP15056 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.27■□□□□ 0.68
BRAFP15056 KRT16P5-201ENST00000455284 522 ntBASIC19.27■□□□□ 0.68
BRAFP15056 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.27■□□□□ 0.68
BRAFP15056 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.27■□□□□ 0.68
BRAFP15056 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.27■□□□□ 0.68
BRAFP15056 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.27■□□□□ 0.68
BRAFP15056 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.27■□□□□ 0.68
BRAFP15056 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.27■□□□□ 0.68
BRAFP15056 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRAFP15056 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRAFP15056 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
BRAFP15056 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
BRAFP15056 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.27■□□□□ 0.67
BRAFP15056 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.27■□□□□ 0.67
BRAFP15056 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
BRAFP15056 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BRAFP15056 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.27■□□□□ 0.67
BRAFP15056 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BRAFP15056 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BRAFP15056 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
BRAFP15056 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAFP15056 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAFP15056 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAFP15056 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.26■□□□□ 0.67
BRAFP15056 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.26■□□□□ 0.67
BRAFP15056 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.26■□□□□ 0.67
BRAFP15056 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
BRAFP15056 ANO7L1-203ENST00000602586 1720 ntBASIC19.26■□□□□ 0.67
BRAFP15056 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAFP15056 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAFP15056 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.26■□□□□ 0.67
BRAFP15056 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
BRAFP15056 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRAFP15056 RPS2P55-201ENST00000397318 883 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms