Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.81■□□□□ 0.6
THRAP10827 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
THRAP10827 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.81■□□□□ 0.6
THRAP10827 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 AC004980.1-204ENST00000429707 299 ntBASIC18.81■□□□□ 0.6
THRAP10827 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.81■□□□□ 0.6
THRAP10827 B3GAT3P1-201ENST00000471720 806 ntBASIC18.81■□□□□ 0.6
THRAP10827 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.81■□□□□ 0.6
THRAP10827 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.81■□□□□ 0.6
THRAP10827 DGCR10-201ENST00000609839 495 ntBASIC18.81■□□□□ 0.6
THRAP10827 AC090164.3-201ENST00000610780 2143 ntBASIC18.81■□□□□ 0.6
THRAP10827 AC092865.7-201ENST00000641832 219 ntBASIC18.81■□□□□ 0.6
THRAP10827 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
THRAP10827 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THRAP10827 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.81■□□□□ 0.6
THRAP10827 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.81■□□□□ 0.6
THRAP10827 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.81■□□□□ 0.6
THRAP10827 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.81■□□□□ 0.6
THRAP10827 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
THRAP10827 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THRAP10827 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
THRAP10827 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
THRAP10827 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THRAP10827 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THRAP10827 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
THRAP10827 AC113347.1-201ENST00000413321 391 ntBASIC18.8■□□□□ 0.6
THRAP10827 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.8■□□□□ 0.6
THRAP10827 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.8■□□□□ 0.6
THRAP10827 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THRAP10827 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.8■□□□□ 0.6
THRAP10827 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
THRAP10827 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.8■□□□□ 0.6
THRAP10827 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THRAP10827 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THRAP10827 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THRAP10827 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
THRAP10827 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THRAP10827 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THRAP10827 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
THRAP10827 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
THRAP10827 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THRAP10827 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THRAP10827 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THRAP10827 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THRAP10827 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THRAP10827 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THRAP10827 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
THRAP10827 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THRAP10827 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
THRAP10827 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
THRAP10827 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.79■□□□□ 0.6
THRAP10827 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.79■□□□□ 0.6
THRAP10827 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.79■□□□□ 0.6
THRAP10827 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.79■□□□□ 0.6
THRAP10827 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.79■□□□□ 0.6
THRAP10827 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.79■□□□□ 0.6
THRAP10827 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.79■□□□□ 0.6
THRAP10827 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THRAP10827 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.79■□□□□ 0.6
THRAP10827 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
THRAP10827 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THRAP10827 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.79■□□□□ 0.6
THRAP10827 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THRAP10827 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.79■□□□□ 0.6
THRAP10827 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
THRAP10827 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THRAP10827 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.79■□□□□ 0.6
THRAP10827 KRT18P22-201ENST00000402024 1347 ntBASIC18.78■□□□□ 0.6
THRAP10827 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
THRAP10827 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THRAP10827 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.78■□□□□ 0.6
THRAP10827 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THRAP10827 AC005521.1-201ENST00000393351 872 ntBASIC18.78■□□□□ 0.6
THRAP10827 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.78■□□□□ 0.6
THRAP10827 AP005242.2-201ENST00000580065 1175 ntBASIC18.78■□□□□ 0.6
THRAP10827 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.78■□□□□ 0.6
THRAP10827 AC131212.4-201ENST00000623606 975 ntBASIC18.78■□□□□ 0.6
THRAP10827 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.78■□□□□ 0.6
THRAP10827 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.78■□□□□ 0.6
THRAP10827 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THRAP10827 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THRAP10827 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.78■□□□□ 0.6
THRAP10827 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
THRAP10827 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
THRAP10827 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
THRAP10827 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms