Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.02■□□□□ 0.8
FAM228BP0C875 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FAM228BP0C875 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
FAM228BP0C875 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FAM228BP0C875 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FAM228BP0C875 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
FAM228BP0C875 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FAM228BP0C875 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
FAM228BP0C875 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.02■□□□□ 0.8
FAM228BP0C875 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.02■□□□□ 0.8
FAM228BP0C875 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FAM228BP0C875 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.02■□□□□ 0.8
FAM228BP0C875 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.02■□□□□ 0.8
FAM228BP0C875 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
FAM228BP0C875 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FAM228BP0C875 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FAM228BP0C875 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
FAM228BP0C875 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FAM228BP0C875 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
FAM228BP0C875 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.02■□□□□ 0.79
FAM228BP0C875 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
FAM228BP0C875 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
FAM228BP0C875 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FAM228BP0C875 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM228BP0C875 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.01■□□□□ 0.79
FAM228BP0C875 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.01■□□□□ 0.79
FAM228BP0C875 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.01■□□□□ 0.79
FAM228BP0C875 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
FAM228BP0C875 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM228BP0C875 AL162741.1-201ENST00000565563 1558 ntBASIC20.01■□□□□ 0.79
FAM228BP0C875 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM228BP0C875 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.01■□□□□ 0.79
FAM228BP0C875 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM228BP0C875 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM228BP0C875 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.01■□□□□ 0.79
FAM228BP0C875 AC004951.3-201ENST00000418645 1148 ntBASIC20.01■□□□□ 0.79
FAM228BP0C875 AC128676.1-201ENST00000454392 318 ntBASIC20.01■□□□□ 0.79
FAM228BP0C875 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.01■□□□□ 0.79
FAM228BP0C875 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.01■□□□□ 0.79
FAM228BP0C875 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.01■□□□□ 0.79
FAM228BP0C875 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.01■□□□□ 0.79
FAM228BP0C875 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM228BP0C875 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM228BP0C875 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FAM228BP0C875 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM228BP0C875 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.01■□□□□ 0.79
FAM228BP0C875 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM228BP0C875 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM228BP0C875 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM228BP0C875 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.01■□□□□ 0.79
FAM228BP0C875 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
FAM228BP0C875 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
FAM228BP0C875 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20■□□□□ 0.79
FAM228BP0C875 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FAM228BP0C875 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FAM228BP0C875 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
FAM228BP0C875 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20■□□□□ 0.79
FAM228BP0C875 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20■□□□□ 0.79
FAM228BP0C875 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FAM228BP0C875 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20■□□□□ 0.79
FAM228BP0C875 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FAM228BP0C875 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20■□□□□ 0.79
FAM228BP0C875 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FAM228BP0C875 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20■□□□□ 0.79
FAM228BP0C875 PCDHB18P-201ENST00000524813 2368 ntBASIC20■□□□□ 0.79
FAM228BP0C875 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FAM228BP0C875 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM228BP0C875 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
FAM228BP0C875 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM228BP0C875 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.99■□□□□ 0.79
FAM228BP0C875 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FAM228BP0C875 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM228BP0C875 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FAM228BP0C875 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM228BP0C875 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM228BP0C875 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM228BP0C875 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
FAM228BP0C875 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.99■□□□□ 0.79
FAM228BP0C875 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.99■□□□□ 0.79
FAM228BP0C875 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM228BP0C875 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.99■□□□□ 0.79
FAM228BP0C875 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.99■□□□□ 0.79
FAM228BP0C875 MIR4651-201ENST00000582622 73 ntBASIC19.99■□□□□ 0.79
FAM228BP0C875 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.99■□□□□ 0.79
FAM228BP0C875 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FAM228BP0C875 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FAM228BP0C875 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM228BP0C875 KRT16P1-201ENST00000399124 1418 ntBASIC19.99■□□□□ 0.79
FAM228BP0C875 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM228BP0C875 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM228BP0C875 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM228BP0C875 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.98■□□□□ 0.79
FAM228BP0C875 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
FAM228BP0C875 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.98■□□□□ 0.79
FAM228BP0C875 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
FAM228BP0C875 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FAM228BP0C875 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FAM228BP0C875 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FAM228BP0C875 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FAM228BP0C875 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms