Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
TCRAP04437 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.29□□□□□ -0.12
TCRAP04437 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.29□□□□□ -0.12
TCRAP04437 AF201337.1-201ENST00000520239 748 ntBASIC14.29□□□□□ -0.12
TCRAP04437 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TCRAP04437 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.29□□□□□ -0.12
TCRAP04437 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.29□□□□□ -0.12
TCRAP04437 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.29□□□□□ -0.12
TCRAP04437 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.29□□□□□ -0.12
TCRAP04437 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.29□□□□□ -0.12
TCRAP04437 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRAP04437 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TCRAP04437 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.28□□□□□ -0.12
TCRAP04437 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TCRAP04437 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.28□□□□□ -0.12
TCRAP04437 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
TCRAP04437 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.28□□□□□ -0.12
TCRAP04437 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TCRAP04437 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.28□□□□□ -0.12
TCRAP04437 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
TCRAP04437 TSPY23P-201ENST00000440136 739 ntBASIC14.28□□□□□ -0.12
TCRAP04437 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRAP04437 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TCRAP04437 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRAP04437 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TCRAP04437 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 AC105036.2-201ENST00000569468 176 ntBASIC14.28□□□□□ -0.12
TCRAP04437 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TCRAP04437 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TCRAP04437 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRAP04437 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
TCRAP04437 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRAP04437 GNAS-203ENST00000306120 1878 ntBASIC14.27□□□□□ -0.12
TCRAP04437 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TCRAP04437 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.27□□□□□ -0.12
TCRAP04437 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.27□□□□□ -0.12
TCRAP04437 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.27□□□□□ -0.12
TCRAP04437 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TCRAP04437 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRAP04437 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRAP04437 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TCRAP04437 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TCRAP04437 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.27□□□□□ -0.13
TCRAP04437 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TCRAP04437 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TCRAP04437 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.27□□□□□ -0.13
TCRAP04437 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.27□□□□□ -0.13
TCRAP04437 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.27□□□□□ -0.13
TCRAP04437 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TCRAP04437 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.27□□□□□ -0.13
TCRAP04437 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
TCRAP04437 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRAP04437 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRAP04437 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
TCRAP04437 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.27□□□□□ -0.13
TCRAP04437 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRAP04437 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRAP04437 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TCRAP04437 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRAP04437 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRAP04437 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRAP04437 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRAP04437 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TCRAP04437 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRAP04437 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRAP04437 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TCRAP04437 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TCRAP04437 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRAP04437 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRAP04437 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TCRAP04437 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.26□□□□□ -0.13
TCRAP04437 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms