Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.41■□□□□ 0.22
LCATP04180 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.41■□□□□ 0.22
LCATP04180 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LCATP04180 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
LCATP04180 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCATP04180 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
LCATP04180 Z98044.1-201ENST00000632503 1764 ntBASIC16.41■□□□□ 0.22
LCATP04180 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCATP04180 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.41■□□□□ 0.22
LCATP04180 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCATP04180 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCATP04180 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.41■□□□□ 0.22
LCATP04180 AL138781.2-201ENST00000617896 1843 ntBASIC16.41■□□□□ 0.22
LCATP04180 AL512353.2-201ENST00000448759 1962 ntBASIC16.41■□□□□ 0.22
LCATP04180 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCATP04180 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
LCATP04180 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
LCATP04180 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCATP04180 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCATP04180 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
LCATP04180 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
LCATP04180 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
LCATP04180 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.41■□□□□ 0.22
LCATP04180 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.41■□□□□ 0.22
LCATP04180 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCATP04180 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LCATP04180 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
LCATP04180 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
LCATP04180 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LCATP04180 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.41■□□□□ 0.22
LCATP04180 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LCATP04180 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LCATP04180 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LCATP04180 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LCATP04180 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCATP04180 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCATP04180 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.4■□□□□ 0.22
LCATP04180 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCATP04180 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
LCATP04180 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCATP04180 AC093525.10-201ENST00000625130 1569 ntBASIC16.4■□□□□ 0.22
LCATP04180 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCATP04180 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.4■□□□□ 0.22
LCATP04180 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.4■□□□□ 0.22
LCATP04180 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.4■□□□□ 0.22
LCATP04180 CKBP1-201ENST00000565489 1086 ntBASIC16.4■□□□□ 0.22
LCATP04180 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
LCATP04180 AC233702.5-201ENST00000584107 538 ntBASIC16.4■□□□□ 0.22
LCATP04180 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.4■□□□□ 0.22
LCATP04180 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.4■□□□□ 0.22
LCATP04180 AL049637.2-201ENST00000641778 930 ntBASIC16.4■□□□□ 0.22
LCATP04180 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.4■□□□□ 0.22
LCATP04180 AL031598.1-201ENST00000561511 1773 ntBASIC16.4■□□□□ 0.22
LCATP04180 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCATP04180 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LCATP04180 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCATP04180 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCATP04180 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCATP04180 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCATP04180 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LCATP04180 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.4■□□□□ 0.22
LCATP04180 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
LCATP04180 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LCATP04180 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
LCATP04180 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
LCATP04180 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LCATP04180 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCATP04180 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCATP04180 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCATP04180 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.39■□□□□ 0.21
LCATP04180 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCATP04180 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LCATP04180 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCATP04180 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LCATP04180 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.39■□□□□ 0.21
LCATP04180 AL355355.2-201ENST00000442321 338 ntBASIC16.39■□□□□ 0.21
LCATP04180 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LCATP04180 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCATP04180 NUDT16P1-203ENST00000513809 620 ntBASIC16.39■□□□□ 0.21
LCATP04180 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.39■□□□□ 0.21
LCATP04180 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.39■□□□□ 0.21
LCATP04180 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.39■□□□□ 0.21
LCATP04180 AC113410.3-201ENST00000623366 203 ntBASIC16.39■□□□□ 0.21
LCATP04180 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LCATP04180 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LCATP04180 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCATP04180 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCATP04180 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCATP04180 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCATP04180 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.39■□□□□ 0.21
LCATP04180 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LCATP04180 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LCATP04180 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.38■□□□□ 0.21
LCATP04180 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LCATP04180 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LCATP04180 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LCATP04180 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.38■□□□□ 0.21
LCATP04180 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.38■□□□□ 0.21
LCATP04180 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LCATP04180 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms