Protein–RNA interactions for Protein: O95777

LSM8, U6 snRNA-associated Sm-like protein LSm8, humanhuman

Known RBP Predictions only

Length 96 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8O95777 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM8O95777 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.79■□□□□ 0.76
LSM8O95777 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LSM8O95777 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM8O95777 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
LSM8O95777 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LSM8O95777 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM8O95777 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM8O95777 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
LSM8O95777 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LSM8O95777 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM8O95777 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LSM8O95777 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM8O95777 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LSM8O95777 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
LSM8O95777 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
LSM8O95777 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM8O95777 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.78■□□□□ 0.76
LSM8O95777 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.78■□□□□ 0.76
LSM8O95777 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM8O95777 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.78■□□□□ 0.76
LSM8O95777 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM8O95777 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM8O95777 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM8O95777 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM8O95777 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LSM8O95777 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSM8O95777 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSM8O95777 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSM8O95777 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LSM8O95777 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LSM8O95777 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSM8O95777 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.77■□□□□ 0.76
LSM8O95777 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSM8O95777 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.77■□□□□ 0.76
LSM8O95777 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.77■□□□□ 0.76
LSM8O95777 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.77■□□□□ 0.76
LSM8O95777 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
LSM8O95777 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.77■□□□□ 0.76
LSM8O95777 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LSM8O95777 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.77■□□□□ 0.76
LSM8O95777 MIR3180-5-201ENST00000583743 153 ntBASIC19.77■□□□□ 0.76
LSM8O95777 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
LSM8O95777 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LSM8O95777 AC116562.4-202ENST00000641738 218 ntBASIC19.77■□□□□ 0.76
LSM8O95777 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSM8O95777 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LSM8O95777 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LSM8O95777 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LSM8O95777 AL499627.1-201ENST00000569373 2188 ntBASIC19.77■□□□□ 0.75
LSM8O95777 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
LSM8O95777 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.77■□□□□ 0.75
LSM8O95777 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
LSM8O95777 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM8O95777 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.76■□□□□ 0.75
LSM8O95777 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.76■□□□□ 0.75
LSM8O95777 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM8O95777 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM8O95777 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM8O95777 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LSM8O95777 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM8O95777 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM8O95777 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM8O95777 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
LSM8O95777 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.76■□□□□ 0.75
LSM8O95777 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
LSM8O95777 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LSM8O95777 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM8O95777 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.76■□□□□ 0.75
LSM8O95777 TSPY14P-201ENST00000303979 915 ntBASIC19.76■□□□□ 0.75
LSM8O95777 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.76■□□□□ 0.75
LSM8O95777 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LSM8O95777 AP003041.3-201ENST00000527151 707 ntBASIC19.76■□□□□ 0.75
LSM8O95777 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.76■□□□□ 0.75
LSM8O95777 BX088651.1-201ENST00000540551 451 ntBASIC19.76■□□□□ 0.75
LSM8O95777 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.76■□□□□ 0.75
LSM8O95777 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.76■□□□□ 0.75
LSM8O95777 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LSM8O95777 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LSM8O95777 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM8O95777 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LSM8O95777 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM8O95777 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LSM8O95777 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LSM8O95777 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.76■□□□□ 0.75
LSM8O95777 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LSM8O95777 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM8O95777 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.75■□□□□ 0.75
LSM8O95777 AC009113.1-201ENST00000570267 2443 ntBASIC19.75■□□□□ 0.75
LSM8O95777 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.75■□□□□ 0.75
LSM8O95777 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.75■□□□□ 0.75
LSM8O95777 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LSM8O95777 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
LSM8O95777 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM8O95777 AC126763.1-201ENST00000552015 2118 ntBASIC19.75■□□□□ 0.75
LSM8O95777 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LSM8O95777 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM8O95777 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LSM8O95777 AP000593.1-201ENST00000393668 712 ntBASIC19.75■□□□□ 0.75
LSM8O95777 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms