Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC11.56□□□□□ -0.56
HERC2O95714 ERF-202ENST00000440177 2032 ntTSL 2 BASIC11.56□□□□□ -0.56
HERC2O95714 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.56□□□□□ -0.56
HERC2O95714 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.56□□□□□ -0.56
HERC2O95714 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.56□□□□□ -0.56
HERC2O95714 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.56□□□□□ -0.56
HERC2O95714 LINC02560-201ENST00000596379 459 ntBASIC11.56□□□□□ -0.56
HERC2O95714 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.56□□□□□ -0.56
HERC2O95714 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.56□□□□□ -0.56
HERC2O95714 ME2-206ENST00000638410 2289 ntTSL 5 BASIC11.56□□□□□ -0.56
HERC2O95714 ME2-210ENST00000639255 2262 ntTSL 5 BASIC11.56□□□□□ -0.56
HERC2O95714 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
HERC2O95714 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.56□□□□□ -0.56
HERC2O95714 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC11.56□□□□□ -0.56
HERC2O95714 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC11.56□□□□□ -0.56
HERC2O95714 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC11.56□□□□□ -0.56
HERC2O95714 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.56□□□□□ -0.56
HERC2O95714 NKAPP1-205ENST00000585790 367 ntBASIC11.56□□□□□ -0.56
HERC2O95714 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HERC2O95714 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 AC080038.3-201ENST00000623346 1952 ntBASIC11.55□□□□□ -0.56
HERC2O95714 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC11.55□□□□□ -0.56
HERC2O95714 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 IGHV3OR16-16-201ENST00000563644 343 ntBASIC11.55□□□□□ -0.56
HERC2O95714 AC105339.1-204ENST00000636249 355 ntBASIC11.55□□□□□ -0.56
HERC2O95714 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC11.55□□□□□ -0.56
HERC2O95714 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HERC2O95714 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
HERC2O95714 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC11.55□□□□□ -0.56
HERC2O95714 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.55□□□□□ -0.56
HERC2O95714 IFT20-216ENST00000588477 774 ntTSL 5 BASIC11.55□□□□□ -0.56
HERC2O95714 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
HERC2O95714 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC11.55□□□□□ -0.56
HERC2O95714 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
HERC2O95714 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
HERC2O95714 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC11.55□□□□□ -0.56
HERC2O95714 Six3os1_5.1-201ENST00000611000 271 ntBASIC11.55□□□□□ -0.56
HERC2O95714 AL121603.2-201ENST00000557373 2117 ntBASIC11.55□□□□□ -0.56
HERC2O95714 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
HERC2O95714 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC11.55□□□□□ -0.56
HERC2O95714 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.55□□□□□ -0.56
HERC2O95714 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 VN2R19P-201ENST00000442399 1052 ntBASIC11.55□□□□□ -0.56
HERC2O95714 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
HERC2O95714 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.55□□□□□ -0.56
HERC2O95714 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
HERC2O95714 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.55□□□□□ -0.56
HERC2O95714 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HERC2O95714 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.55□□□□□ -0.56
HERC2O95714 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HERC2O95714 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HERC2O95714 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HERC2O95714 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.54□□□□□ -0.56
HERC2O95714 AL353692.3-201ENST00000407031 1396 ntBASIC11.54□□□□□ -0.56
HERC2O95714 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC11.54□□□□□ -0.56
HERC2O95714 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HERC2O95714 AC112777.1-201ENST00000540175 1423 ntBASIC11.54□□□□□ -0.56
HERC2O95714 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HERC2O95714 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HERC2O95714 RNA5SP423-201ENST00000517127 109 ntBASIC11.54□□□□□ -0.56
HERC2O95714 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.54□□□□□ -0.56
HERC2O95714 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.54□□□□□ -0.56
HERC2O95714 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.54□□□□□ -0.56
HERC2O95714 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.54□□□□□ -0.56
HERC2O95714 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HERC2O95714 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HERC2O95714 AC005229.4-201ENST00000610085 2198 ntBASIC11.54□□□□□ -0.56
HERC2O95714 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HERC2O95714 HCG4B-203ENST00000450128 991 ntBASIC11.54□□□□□ -0.56
HERC2O95714 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.54□□□□□ -0.56
HERC2O95714 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
HERC2O95714 AC018845.2-201ENST00000568326 409 ntBASIC11.54□□□□□ -0.56
HERC2O95714 TEN1-204ENST00000588202 862 ntTSL 3 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms