Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDKL5O76039 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDKL5O76039 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.8■■□□□ 1.08
CDKL5O76039 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.8■■□□□ 1.08
CDKL5O76039 SLC25A1P2-201ENST00000430693 912 ntBASIC21.8■■□□□ 1.08
CDKL5O76039 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.8■■□□□ 1.08
CDKL5O76039 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.8■■□□□ 1.08
CDKL5O76039 FITM1-202ENST00000559294 800 ntBASIC21.8■■□□□ 1.08
CDKL5O76039 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CDKL5O76039 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDKL5O76039 AP000525.1-201ENST00000608286 694 ntBASIC21.8■■□□□ 1.08
CDKL5O76039 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.8■■□□□ 1.08
CDKL5O76039 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CDKL5O76039 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDKL5O76039 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDKL5O76039 AL357033.4-201ENST00000617703 1807 ntBASIC21.8■■□□□ 1.08
CDKL5O76039 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDKL5O76039 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDKL5O76039 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.8■■□□□ 1.08
CDKL5O76039 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDKL5O76039 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.79■■□□□ 1.08
CDKL5O76039 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.79■■□□□ 1.08
CDKL5O76039 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 AC079598.2-202ENST00000546624 1451 ntBASIC21.79■■□□□ 1.08
CDKL5O76039 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
CDKL5O76039 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.79■■□□□ 1.08
CDKL5O76039 MCCD1P1-208ENST00000445732 328 ntBASIC21.79■■□□□ 1.08
CDKL5O76039 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.79■■□□□ 1.08
CDKL5O76039 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CDKL5O76039 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.79■■□□□ 1.08
CDKL5O76039 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.79■■□□□ 1.08
CDKL5O76039 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.79■■□□□ 1.08
CDKL5O76039 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
CDKL5O76039 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDKL5O76039 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.78■■□□□ 1.08
CDKL5O76039 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CDKL5O76039 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.78■■□□□ 1.08
CDKL5O76039 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CDKL5O76039 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.78■■□□□ 1.08
CDKL5O76039 AL023284.2-201ENST00000405850 579 ntBASIC21.78■■□□□ 1.08
CDKL5O76039 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
CDKL5O76039 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CDKL5O76039 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDKL5O76039 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.77■■□□□ 1.08
CDKL5O76039 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.77■■□□□ 1.08
CDKL5O76039 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 GPAT2P1-201ENST00000444924 1672 ntBASIC21.77■■□□□ 1.08
CDKL5O76039 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CDKL5O76039 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.77■■□□□ 1.08
CDKL5O76039 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.77■■□□□ 1.08
CDKL5O76039 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.77■■□□□ 1.08
CDKL5O76039 AL355075.4-201ENST00000554988 638 ntBASIC21.77■■□□□ 1.08
CDKL5O76039 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CDKL5O76039 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 AC112777.1-201ENST00000540175 1423 ntBASIC21.77■■□□□ 1.08
CDKL5O76039 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDKL5O76039 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms