Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TSPAN3O60637 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
TSPAN3O60637 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TSPAN3O60637 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TSPAN3O60637 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TSPAN3O60637 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.33■□□□□ 0.68
TSPAN3O60637 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TSPAN3O60637 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TSPAN3O60637 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN3O60637 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TSPAN3O60637 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
TSPAN3O60637 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TSPAN3O60637 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TSPAN3O60637 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN3O60637 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN3O60637 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN3O60637 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN3O60637 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN3O60637 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.32■□□□□ 0.68
TSPAN3O60637 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.32■□□□□ 0.68
TSPAN3O60637 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.32■□□□□ 0.68
TSPAN3O60637 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.32■□□□□ 0.68
TSPAN3O60637 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.32■□□□□ 0.68
TSPAN3O60637 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN3O60637 KRT8P32-201ENST00000512863 1461 ntBASIC19.32■□□□□ 0.68
TSPAN3O60637 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN3O60637 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN3O60637 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN3O60637 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN3O60637 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN3O60637 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
TSPAN3O60637 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN3O60637 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN3O60637 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN3O60637 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN3O60637 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN3O60637 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.31■□□□□ 0.68
TSPAN3O60637 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TSPAN3O60637 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.31■□□□□ 0.68
TSPAN3O60637 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.31■□□□□ 0.68
TSPAN3O60637 HOMER2P1-201ENST00000455653 964 ntBASIC19.31■□□□□ 0.68
TSPAN3O60637 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.31■□□□□ 0.68
TSPAN3O60637 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN3O60637 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.31■□□□□ 0.68
TSPAN3O60637 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.31■□□□□ 0.68
TSPAN3O60637 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.31■□□□□ 0.68
TSPAN3O60637 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.31■□□□□ 0.68
TSPAN3O60637 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.31■□□□□ 0.68
TSPAN3O60637 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.31■□□□□ 0.68
TSPAN3O60637 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.31■□□□□ 0.68
TSPAN3O60637 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.31■□□□□ 0.68
TSPAN3O60637 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN3O60637 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN3O60637 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN3O60637 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN3O60637 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN3O60637 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.31■□□□□ 0.68
TSPAN3O60637 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN3O60637 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN3O60637 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN3O60637 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.3■□□□□ 0.68
TSPAN3O60637 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN3O60637 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN3O60637 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN3O60637 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.3■□□□□ 0.68
TSPAN3O60637 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
TSPAN3O60637 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN3O60637 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN3O60637 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.3■□□□□ 0.68
TSPAN3O60637 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.3■□□□□ 0.68
TSPAN3O60637 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN3O60637 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN3O60637 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.3■□□□□ 0.68
TSPAN3O60637 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN3O60637 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TSPAN3O60637 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN3O60637 AL109659.2-201ENST00000606809 1674 ntBASIC19.3■□□□□ 0.68
TSPAN3O60637 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN3O60637 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.3■□□□□ 0.68
TSPAN3O60637 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN3O60637 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN3O60637 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN3O60637 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN3O60637 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN3O60637 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TSPAN3O60637 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN3O60637 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TSPAN3O60637 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN3O60637 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.29■□□□□ 0.68
TSPAN3O60637 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
TSPAN3O60637 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN3O60637 AL031133.1-201ENST00000406807 723 ntBASIC19.29■□□□□ 0.68
TSPAN3O60637 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.29■□□□□ 0.68
TSPAN3O60637 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.29■□□□□ 0.68
TSPAN3O60637 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.29■□□□□ 0.68
TSPAN3O60637 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN3O60637 MYC-208ENST00000641036 567 ntBASIC19.29■□□□□ 0.68
TSPAN3O60637 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN3O60637 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.29■□□□□ 0.68
TSPAN3O60637 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms