Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
FOXD2O60548 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXD2O60548 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
FOXD2O60548 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 RASA4DP-201ENST00000460726 1199 ntBASIC18.85■□□□□ 0.61
FOXD2O60548 AC009078.2-202ENST00000463353 338 ntBASIC18.85■□□□□ 0.61
FOXD2O60548 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.85■□□□□ 0.61
FOXD2O60548 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.85■□□□□ 0.61
FOXD2O60548 AC104692.2-201ENST00000603054 253 ntBASIC18.85■□□□□ 0.61
FOXD2O60548 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.85■□□□□ 0.61
FOXD2O60548 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
FOXD2O60548 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.85■□□□□ 0.61
FOXD2O60548 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 FZD10-202ENST00000539839 3282 ntBASIC18.85■□□□□ 0.61
FOXD2O60548 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FOXD2O60548 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.84■□□□□ 0.61
FOXD2O60548 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.84■□□□□ 0.61
FOXD2O60548 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXD2O60548 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXD2O60548 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXD2O60548 KRT18P1-202ENST00000452408 1331 ntBASIC18.84■□□□□ 0.61
FOXD2O60548 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXD2O60548 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.84■□□□□ 0.61
FOXD2O60548 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXD2O60548 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
FOXD2O60548 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
FOXD2O60548 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
FOXD2O60548 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.84■□□□□ 0.61
FOXD2O60548 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXD2O60548 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
FOXD2O60548 AL031008.1-201ENST00000619963 541 ntBASIC18.84■□□□□ 0.61
FOXD2O60548 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXD2O60548 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXD2O60548 AC006128.1-201ENST00000624704 1661 ntBASIC18.84■□□□□ 0.61
FOXD2O60548 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
FOXD2O60548 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.84■□□□□ 0.61
FOXD2O60548 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXD2O60548 AC005332.8-201ENST00000622750 2735 ntBASIC18.84■□□□□ 0.61
FOXD2O60548 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXD2O60548 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXD2O60548 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXD2O60548 AC005082.1-201ENST00000413042 2259 ntBASIC18.84■□□□□ 0.61
FOXD2O60548 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXD2O60548 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
FOXD2O60548 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FOXD2O60548 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FOXD2O60548 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
FOXD2O60548 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
FOXD2O60548 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.83■□□□□ 0.61
FOXD2O60548 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.83■□□□□ 0.61
FOXD2O60548 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FOXD2O60548 CHCHD2P8-201ENST00000429873 447 ntBASIC18.83■□□□□ 0.6
FOXD2O60548 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.83■□□□□ 0.6
FOXD2O60548 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.83■□□□□ 0.6
FOXD2O60548 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.83■□□□□ 0.6
FOXD2O60548 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
FOXD2O60548 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
FOXD2O60548 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXD2O60548 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
FOXD2O60548 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.83■□□□□ 0.6
FOXD2O60548 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXD2O60548 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXD2O60548 AC007613.1-201ENST00000572811 2597 ntBASIC18.83■□□□□ 0.6
FOXD2O60548 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
FOXD2O60548 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXD2O60548 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXD2O60548 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXD2O60548 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXD2O60548 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXD2O60548 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXD2O60548 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXD2O60548 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXD2O60548 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXD2O60548 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXD2O60548 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXD2O60548 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
FOXD2O60548 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXD2O60548 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
FOXD2O60548 EMBP1-201ENST00000458200 901 ntBASIC18.82■□□□□ 0.6
FOXD2O60548 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms