Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX3O60493 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX3O60493 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX3O60493 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.48■□□□□ 0.55
SNX3O60493 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SNX3O60493 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX3O60493 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX3O60493 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX3O60493 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX3O60493 AC068338.2-201ENST00000563278 1430 ntBASIC18.48■□□□□ 0.55
SNX3O60493 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SNX3O60493 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.48■□□□□ 0.55
SNX3O60493 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX3O60493 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX3O60493 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX3O60493 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.47■□□□□ 0.55
SNX3O60493 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.47■□□□□ 0.55
SNX3O60493 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX3O60493 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX3O60493 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX3O60493 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX3O60493 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX3O60493 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX3O60493 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.47■□□□□ 0.55
SNX3O60493 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX3O60493 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX3O60493 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SNX3O60493 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX3O60493 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SNX3O60493 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX3O60493 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX3O60493 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX3O60493 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX3O60493 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX3O60493 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SNX3O60493 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX3O60493 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SNX3O60493 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.46■□□□□ 0.55
SNX3O60493 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.46■□□□□ 0.55
SNX3O60493 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SNX3O60493 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
SNX3O60493 FLJ13224-201ENST00000313737 1514 ntBASIC18.46■□□□□ 0.55
SNX3O60493 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.46■□□□□ 0.55
SNX3O60493 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.46■□□□□ 0.55
SNX3O60493 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SNX3O60493 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SNX3O60493 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.46■□□□□ 0.55
SNX3O60493 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.46■□□□□ 0.55
SNX3O60493 TSPY21P-201ENST00000433481 731 ntBASIC18.46■□□□□ 0.55
SNX3O60493 YBX1P10-201ENST00000444752 975 ntBASIC18.46■□□□□ 0.55
SNX3O60493 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.46■□□□□ 0.55
SNX3O60493 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SNX3O60493 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SNX3O60493 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.46■□□□□ 0.55
SNX3O60493 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX3O60493 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.46■□□□□ 0.55
SNX3O60493 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
SNX3O60493 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.45■□□□□ 0.54
SNX3O60493 NKILA-202ENST00000614771 2598 ntBASIC18.45■□□□□ 0.54
SNX3O60493 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNX3O60493 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNX3O60493 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNX3O60493 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.45■□□□□ 0.54
SNX3O60493 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.45■□□□□ 0.54
SNX3O60493 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.45■□□□□ 0.54
SNX3O60493 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SNX3O60493 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.45■□□□□ 0.54
SNX3O60493 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.45■□□□□ 0.54
SNX3O60493 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SNX3O60493 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.45■□□□□ 0.54
SNX3O60493 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX3O60493 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX3O60493 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SNX3O60493 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX3O60493 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SNX3O60493 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX3O60493 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX3O60493 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX3O60493 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX3O60493 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX3O60493 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms