Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 AC034236.2-201ENST00000606662 1610 ntBASIC17.98■□□□□ 0.47
DUX1O43812 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DUX1O43812 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.97■□□□□ 0.47
DUX1O43812 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.97■□□□□ 0.47
DUX1O43812 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.97■□□□□ 0.47
DUX1O43812 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
DUX1O43812 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.97■□□□□ 0.47
DUX1O43812 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 DUSP5P1-201ENST00000441325 1139 ntBASIC17.97■□□□□ 0.47
DUX1O43812 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
DUX1O43812 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.97■□□□□ 0.47
DUX1O43812 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.97■□□□□ 0.47
DUX1O43812 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.97■□□□□ 0.47
DUX1O43812 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.97■□□□□ 0.47
DUX1O43812 AC104390.1-201ENST00000555663 520 ntBASIC17.97■□□□□ 0.47
DUX1O43812 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.97■□□□□ 0.47
DUX1O43812 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
DUX1O43812 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
DUX1O43812 AC010240.3-201ENST00000607688 395 ntBASIC17.97■□□□□ 0.47
DUX1O43812 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.97■□□□□ 0.47
DUX1O43812 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
DUX1O43812 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.97■□□□□ 0.47
DUX1O43812 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.97■□□□□ 0.47
DUX1O43812 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
DUX1O43812 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DUX1O43812 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX1O43812 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.96■□□□□ 0.47
DUX1O43812 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX1O43812 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX1O43812 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.96■□□□□ 0.47
DUX1O43812 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
DUX1O43812 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DUX1O43812 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.96■□□□□ 0.47
DUX1O43812 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.96■□□□□ 0.47
DUX1O43812 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
DUX1O43812 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DUX1O43812 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.96■□□□□ 0.47
DUX1O43812 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
DUX1O43812 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.96■□□□□ 0.47
DUX1O43812 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.96■□□□□ 0.47
DUX1O43812 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.96■□□□□ 0.47
DUX1O43812 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
DUX1O43812 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.96■□□□□ 0.47
DUX1O43812 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.96■□□□□ 0.47
DUX1O43812 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX1O43812 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.96■□□□□ 0.47
DUX1O43812 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX1O43812 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.96■□□□□ 0.47
DUX1O43812 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
DUX1O43812 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DUX1O43812 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
DUX1O43812 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX1O43812 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
DUX1O43812 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.96■□□□□ 0.47
DUX1O43812 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DUX1O43812 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
DUX1O43812 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
DUX1O43812 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
DUX1O43812 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.96■□□□□ 0.46
DUX1O43812 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.95■□□□□ 0.46
DUX1O43812 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.95■□□□□ 0.46
DUX1O43812 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.95■□□□□ 0.46
DUX1O43812 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.95■□□□□ 0.46
DUX1O43812 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
DUX1O43812 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.95■□□□□ 0.46
DUX1O43812 HLA-F-220ENST00000434407 884 ntBASIC17.95■□□□□ 0.46
DUX1O43812 TPM4P1-201ENST00000436100 807 ntBASIC17.95■□□□□ 0.46
DUX1O43812 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.95■□□□□ 0.46
DUX1O43812 AL032819.2-201ENST00000624543 2162 ntBASIC17.95■□□□□ 0.46
DUX1O43812 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DUX1O43812 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms