Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC12.85□□□□□ -0.35
NDUFA1O15239 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC12.85□□□□□ -0.35
NDUFA1O15239 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.85□□□□□ -0.35
NDUFA1O15239 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC12.85□□□□□ -0.35
NDUFA1O15239 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NDUFA1O15239 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
NDUFA1O15239 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
NDUFA1O15239 FEM1AP3-201ENST00000403722 1741 ntBASIC12.85□□□□□ -0.35
NDUFA1O15239 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NDUFA1O15239 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.84□□□□□ -0.35
NDUFA1O15239 SDHAP1-207ENST00000440850 2000 ntBASIC12.84□□□□□ -0.35
NDUFA1O15239 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFA1O15239 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFA1O15239 AC104417.2-201ENST00000562989 1793 ntBASIC12.84□□□□□ -0.35
NDUFA1O15239 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFA1O15239 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.84□□□□□ -0.35
NDUFA1O15239 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFA1O15239 COBL-210ENST00000632460 1941 ntTSL 5 BASIC12.84□□□□□ -0.35
NDUFA1O15239 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NDUFA1O15239 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC12.84□□□□□ -0.35
NDUFA1O15239 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFA1O15239 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC12.84□□□□□ -0.35
NDUFA1O15239 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC12.84□□□□□ -0.35
NDUFA1O15239 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC12.84□□□□□ -0.35
NDUFA1O15239 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NDUFA1O15239 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFA1O15239 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC12.84□□□□□ -0.35
NDUFA1O15239 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NDUFA1O15239 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NDUFA1O15239 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.84□□□□□ -0.35
NDUFA1O15239 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFA1O15239 TFP1-202ENST00000475455 1573 ntBASIC12.84□□□□□ -0.35
NDUFA1O15239 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFA1O15239 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NDUFA1O15239 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFA1O15239 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFA1O15239 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC12.84□□□□□ -0.35
NDUFA1O15239 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFA1O15239 SIRPAP1-201ENST00000448467 1770 ntBASIC12.84□□□□□ -0.35
NDUFA1O15239 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.84□□□□□ -0.35
NDUFA1O15239 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFA1O15239 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NDUFA1O15239 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
NDUFA1O15239 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
NDUFA1O15239 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
NDUFA1O15239 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.83□□□□□ -0.35
NDUFA1O15239 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
NDUFA1O15239 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC12.83□□□□□ -0.35
NDUFA1O15239 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC12.83□□□□□ -0.35
NDUFA1O15239 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
NDUFA1O15239 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
NDUFA1O15239 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NDUFA1O15239 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
NDUFA1O15239 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NDUFA1O15239 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
NDUFA1O15239 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC12.83□□□□□ -0.36
NDUFA1O15239 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NDUFA1O15239 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NDUFA1O15239 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NDUFA1O15239 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC12.83□□□□□ -0.36
NDUFA1O15239 GLI3-203ENST00000437480 451 ntTSL 2 BASIC12.83□□□□□ -0.36
NDUFA1O15239 NME6-213ENST00000451657 871 ntTSL 2 BASIC12.83□□□□□ -0.36
NDUFA1O15239 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC12.83□□□□□ -0.36
NDUFA1O15239 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC12.83□□□□□ -0.36
NDUFA1O15239 MAX-217ENST00000557277 728 ntTSL 3 BASIC12.83□□□□□ -0.36
NDUFA1O15239 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
NDUFA1O15239 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.83□□□□□ -0.36
NDUFA1O15239 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 ANKRD18DP-204ENST00000455355 1975 ntBASIC12.83□□□□□ -0.36
NDUFA1O15239 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NDUFA1O15239 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
NDUFA1O15239 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.83□□□□□ -0.36
NDUFA1O15239 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFA1O15239 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NDUFA1O15239 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.82□□□□□ -0.36
NDUFA1O15239 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFA1O15239 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NDUFA1O15239 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms