Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM38O00635 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM38O00635 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM38O00635 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM38O00635 AL031133.1-201ENST00000406807 723 ntBASIC18.86■□□□□ 0.61
TRIM38O00635 UPK3BP1-201ENST00000428678 509 ntBASIC18.86■□□□□ 0.61
TRIM38O00635 COX11P1-201ENST00000489116 835 ntBASIC18.86■□□□□ 0.61
TRIM38O00635 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM38O00635 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM38O00635 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM38O00635 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM38O00635 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM38O00635 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM38O00635 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM38O00635 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TRIM38O00635 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM38O00635 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
TRIM38O00635 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM38O00635 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM38O00635 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 TSPY17P-201ENST00000450329 467 ntBASIC18.85■□□□□ 0.61
TRIM38O00635 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM38O00635 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM38O00635 AC091076.1-201ENST00000610741 619 ntBASIC18.85■□□□□ 0.61
TRIM38O00635 AC141257.4-201ENST00000634557 245 ntBASIC18.85■□□□□ 0.61
TRIM38O00635 AC136944.6-201ENST00000634818 245 ntBASIC18.85■□□□□ 0.61
TRIM38O00635 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM38O00635 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM38O00635 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM38O00635 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM38O00635 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRIM38O00635 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM38O00635 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM38O00635 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM38O00635 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM38O00635 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM38O00635 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM38O00635 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM38O00635 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM38O00635 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM38O00635 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
TRIM38O00635 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM38O00635 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM38O00635 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM38O00635 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRIM38O00635 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM38O00635 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM38O00635 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM38O00635 AL353719.1-201ENST00000566847 864 ntBASIC18.84■□□□□ 0.61
TRIM38O00635 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM38O00635 AC011558.1-201ENST00000623459 338 ntBASIC18.84■□□□□ 0.61
TRIM38O00635 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM38O00635 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM38O00635 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRIM38O00635 AP001271.2-201ENST00000624018 1556 ntBASIC18.84■□□□□ 0.61
TRIM38O00635 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM38O00635 CROCCP3-202ENST00000420820 1947 ntBASIC18.84■□□□□ 0.61
TRIM38O00635 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRIM38O00635 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM38O00635 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.83■□□□□ 0.61
TRIM38O00635 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.83■□□□□ 0.61
TRIM38O00635 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM38O00635 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM38O00635 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM38O00635 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM38O00635 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM38O00635 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM38O00635 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM38O00635 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM38O00635 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM38O00635 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM38O00635 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM38O00635 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM38O00635 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM38O00635 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TRIM38O00635 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.83■□□□□ 0.6
TRIM38O00635 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM38O00635 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.83■□□□□ 0.6
TRIM38O00635 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.83■□□□□ 0.6
TRIM38O00635 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM38O00635 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.83■□□□□ 0.6
TRIM38O00635 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms