Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TAF4O00268 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.35■□□□□ 0.53
TAF4O00268 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TAF4O00268 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TAF4O00268 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TAF4O00268 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.35■□□□□ 0.53
TAF4O00268 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.35■□□□□ 0.53
TAF4O00268 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.35■□□□□ 0.53
TAF4O00268 MIR3180-1-201ENST00000580374 94 ntBASIC18.35■□□□□ 0.53
TAF4O00268 MIR3180-3-201ENST00000584616 94 ntBASIC18.35■□□□□ 0.53
TAF4O00268 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TAF4O00268 IFNL4P1-201ENST00000607083 540 ntBASIC18.35■□□□□ 0.53
TAF4O00268 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TAF4O00268 AC117500.6-201ENST00000624871 588 ntBASIC18.35■□□□□ 0.53
TAF4O00268 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TAF4O00268 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TAF4O00268 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TAF4O00268 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TAF4O00268 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.35■□□□□ 0.53
TAF4O00268 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TAF4O00268 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.34■□□□□ 0.53
TAF4O00268 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.34■□□□□ 0.53
TAF4O00268 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
TAF4O00268 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TAF4O00268 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TAF4O00268 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TAF4O00268 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TAF4O00268 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TAF4O00268 AC090340.1-201ENST00000620778 4980 ntBASIC18.34■□□□□ 0.53
TAF4O00268 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TAF4O00268 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TAF4O00268 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.34■□□□□ 0.53
TAF4O00268 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TAF4O00268 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.34■□□□□ 0.53
TAF4O00268 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TAF4O00268 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.34■□□□□ 0.53
TAF4O00268 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TAF4O00268 STARP1-201ENST00000397973 869 ntBASIC18.34■□□□□ 0.53
TAF4O00268 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TAF4O00268 TUBB8P6-201ENST00000436895 1288 ntBASIC18.34■□□□□ 0.53
TAF4O00268 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.34■□□□□ 0.53
TAF4O00268 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TAF4O00268 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TAF4O00268 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.34■□□□□ 0.53
TAF4O00268 AL160237.2-201ENST00000556165 472 ntBASIC18.34■□□□□ 0.53
TAF4O00268 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TAF4O00268 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
TAF4O00268 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.34■□□□□ 0.53
TAF4O00268 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TAF4O00268 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TAF4O00268 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TAF4O00268 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TAF4O00268 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TAF4O00268 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.33■□□□□ 0.53
TAF4O00268 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TAF4O00268 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TAF4O00268 KRT8P20-201ENST00000423953 1409 ntBASIC18.33■□□□□ 0.53
TAF4O00268 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TAF4O00268 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TAF4O00268 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TAF4O00268 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TAF4O00268 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TAF4O00268 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TAF4O00268 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TAF4O00268 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TAF4O00268 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TAF4O00268 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.33■□□□□ 0.52
TAF4O00268 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.33■□□□□ 0.52
TAF4O00268 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.33■□□□□ 0.52
TAF4O00268 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.33■□□□□ 0.52
TAF4O00268 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.33■□□□□ 0.52
TAF4O00268 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.33■□□□□ 0.52
TAF4O00268 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.33■□□□□ 0.52
TAF4O00268 LINC02084-201ENST00000606069 1096 ntBASIC18.33■□□□□ 0.52
TAF4O00268 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.33■□□□□ 0.52
TAF4O00268 HLA-A-209ENST00000638375 975 ntBASIC18.33■□□□□ 0.52
TAF4O00268 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TAF4O00268 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TAF4O00268 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TAF4O00268 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TAF4O00268 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TAF4O00268 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TAF4O00268 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TAF4O00268 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TAF4O00268 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
TAF4O00268 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TAF4O00268 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.32■□□□□ 0.52
TAF4O00268 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TAF4O00268 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.32■□□□□ 0.52
TAF4O00268 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.32■□□□□ 0.52
TAF4O00268 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.32■□□□□ 0.52
TAF4O00268 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TAF4O00268 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TAF4O00268 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TAF4O00268 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
TAF4O00268 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TAF4O00268 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TAF4O00268 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TAF4O00268 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TAF4O00268 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms