Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.91■□□□□ 0.62
TCRBV9S1A1TA0A576 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 AC239809.2-201ENST00000415381 517 ntBASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 RNA5SP413-201ENST00000516373 109 ntBASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 AC090192.1-201ENST00000517740 490 ntBASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 KRT8P3-201ENST00000519669 1449 ntBASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRBV9S1A1TA0A576 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TCRBV9S1A1TA0A576 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TCRBV9S1A1TA0A576 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.89■□□□□ 0.62
TCRBV9S1A1TA0A576 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TCRBV9S1A1TA0A576 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.89■□□□□ 0.62
TCRBV9S1A1TA0A576 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 PRSS44-201ENST00000515154 1146 ntBASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.89■□□□□ 0.61
TCRBV9S1A1TA0A576 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 AC135776.1-201ENST00000319817 2481 ntBASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 AC092666.2-201ENST00000613287 246 ntBASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 AL357033.4-201ENST00000617703 1807 ntBASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV9S1A1TA0A576 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV9S1A1TA0A576 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms