Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 AC011506.1-201ENST00000474329 610 ntBASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.09■□□□□ 0.65
TCRBV7S3A2A0A539 KRT16P1-201ENST00000399124 1418 ntBASIC19.08■□□□□ 0.65
TCRBV7S3A2A0A539 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.08■□□□□ 0.65
TCRBV7S3A2A0A539 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV7S3A2A0A539 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV7S3A2A0A539 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV7S3A2A0A539 NOC2LP2-201ENST00000407594 1944 ntBASIC19.08■□□□□ 0.65
TCRBV7S3A2A0A539 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.08■□□□□ 0.65
TCRBV7S3A2A0A539 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV7S3A2A0A539 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV7S3A2A0A539 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV7S3A2A0A539 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.08■□□□□ 0.65
TCRBV7S3A2A0A539 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 AC011298.2-201ENST00000617989 482 ntBASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.08■□□□□ 0.64
TCRBV7S3A2A0A539 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 AF186192.3-201ENST00000583427 947 ntBASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 AC130371.2-201ENST00000619443 611 ntBASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV7S3A2A0A539 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 CKBP1-201ENST00000565489 1086 ntBASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 PCDHB18P-201ENST00000524813 2368 ntBASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV7S3A2A0A539 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
TCRBV7S3A2A0A539 RCC2P3-201ENST00000418112 1537 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms