Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 MIR3180-5-201ENST00000583743 153 ntBASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 AC073912.3-201ENST00000624414 853 ntBASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 LINC01568-207ENST00000641790 1380 ntBASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 MIR564-202ENST00000385049 94 ntBASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 AC087499.1-201ENST00000418141 1075 ntBASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 MIR4674-201ENST00000582457 87 ntBASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC196A0A1B0GTZ2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 MYC-208ENST00000641036 567 ntBASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 KRT18P22-201ENST00000402024 1347 ntBASIC21.78■■□□□ 1.08
CCDC196A0A1B0GTZ2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 AL512604.3-201ENST00000569583 964 ntBASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCDC196A0A1B0GTZ2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC196A0A1B0GTZ2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.77■■□□□ 1.07
CCDC196A0A1B0GTZ2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC196A0A1B0GTZ2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.07
CCDC196A0A1B0GTZ2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC196A0A1B0GTZ2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC196A0A1B0GTZ2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC196A0A1B0GTZ2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms