Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 AC008687.6-201ENST00000596318 630 ntBASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 AC104771.1-201ENST00000603335 964 ntBASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 TNRC18P3-201ENST00000441896 2691 ntBASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 AC093484.2-201ENST00000580996 2166 ntBASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 PRKY-204ENST00000533551 1019 ntBASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 AC083880.1-201ENST00000608266 535 ntBASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV8-4A0A0B4J246 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRAV8-4A0A0B4J246 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRAV8-4A0A0B4J246 AC063926.3-201ENST00000624734 5658 ntBASIC13.15□□□□□ -0.31
TRAV8-4A0A0B4J246 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRAV8-4A0A0B4J246 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 Z82202.1-201ENST00000623446 1880 ntBASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 SOX15-203ENST00000570788 1093 ntBASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.14□□□□□ -0.31
TRAV8-4A0A0B4J246 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms