Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRBV6-7A0A0A0MS04 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 UNC93B5-201ENST00000530315 699 ntBASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 AC099398.1-201ENST00000567919 2776 ntBASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.71■□□□□ 0.11
TRBV6-7A0A0A0MS04 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRBV6-7A0A0A0MS04 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.1
TRBV6-7A0A0A0MS04 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRBV6-7A0A0A0MS04 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRBV6-7A0A0A0MS04 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRBV6-7A0A0A0MS04 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRBV6-7A0A0A0MS04 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC126763.1-201ENST00000552015 2118 ntBASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-7A0A0A0MS04 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-7A0A0A0MS04 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms