Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LSM4Q9Y4Z0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSM4Q9Y4Z0 AC100797.4-201ENST00000631653 1827 ntBASIC20.06■□□□□ 0.8
LSM4Q9Y4Z0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.05■□□□□ 0.8
LSM4Q9Y4Z0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LSM4Q9Y4Z0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM4Q9Y4Z0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM4Q9Y4Z0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSM4Q9Y4Z0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LSM4Q9Y4Z0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.05■□□□□ 0.8
LSM4Q9Y4Z0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 AC021231.2-201ENST00000594613 730 ntBASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 AC135731.1-201ENST00000569415 2548 ntBASIC20.04■□□□□ 0.8
LSM4Q9Y4Z0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM4Q9Y4Z0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.03■□□□□ 0.8
LSM4Q9Y4Z0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM4Q9Y4Z0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSM4Q9Y4Z0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LSM4Q9Y4Z0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.02■□□□□ 0.8
LSM4Q9Y4Z0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LSM4Q9Y4Z0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LSM4Q9Y4Z0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LSM4Q9Y4Z0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.01■□□□□ 0.79
LSM4Q9Y4Z0 AP002414.2-202ENST00000590929 1450 ntBASIC20■□□□□ 0.79
LSM4Q9Y4Z0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSM4Q9Y4Z0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20■□□□□ 0.79
LSM4Q9Y4Z0 MIR4449-201ENST00000578365 66 ntBASIC20■□□□□ 0.79
LSM4Q9Y4Z0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSM4Q9Y4Z0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20■□□□□ 0.79
LSM4Q9Y4Z0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSM4Q9Y4Z0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.99■□□□□ 0.79
LSM4Q9Y4Z0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
LSM4Q9Y4Z0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM4Q9Y4Z0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM4Q9Y4Z0 AL449106.1-201ENST00000608517 1980 ntBASIC19.99■□□□□ 0.79
LSM4Q9Y4Z0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM4Q9Y4Z0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM4Q9Y4Z0 MIR639-201ENST00000384974 98 ntBASIC19.98■□□□□ 0.79
LSM4Q9Y4Z0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM4Q9Y4Z0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
LSM4Q9Y4Z0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LSM4Q9Y4Z0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LSM4Q9Y4Z0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.97■□□□□ 0.79
LSM4Q9Y4Z0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM4Q9Y4Z0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LSM4Q9Y4Z0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LSM4Q9Y4Z0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LSM4Q9Y4Z0 AC108673.1-201ENST00000510422 1159 ntBASIC19.96■□□□□ 0.79
LSM4Q9Y4Z0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.96■□□□□ 0.79
LSM4Q9Y4Z0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM4Q9Y4Z0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM4Q9Y4Z0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LSM4Q9Y4Z0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.95■□□□□ 0.78
LSM4Q9Y4Z0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM4Q9Y4Z0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM4Q9Y4Z0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM4Q9Y4Z0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM4Q9Y4Z0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.94■□□□□ 0.78
LSM4Q9Y4Z0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.93■□□□□ 0.78
LSM4Q9Y4Z0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LSM4Q9Y4Z0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSM4Q9Y4Z0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSM4Q9Y4Z0 MIR6090-201ENST00000622481 60 ntBASIC19.93■□□□□ 0.78
LSM4Q9Y4Z0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.93■□□□□ 0.78
LSM4Q9Y4Z0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LSM4Q9Y4Z0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM4Q9Y4Z0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM4Q9Y4Z0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM4Q9Y4Z0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM4Q9Y4Z0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM4Q9Y4Z0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 AC091060.1-201ENST00000623524 1766 ntBASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM4Q9Y4Z0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 MIR3648-2-201ENST00000581792 180 ntBASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 MIR3648-1-201ENST00000615959 180 ntBASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LSM4Q9Y4Z0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSM4Q9Y4Z0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSM4Q9Y4Z0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.88■□□□□ 0.77
LSM4Q9Y4Z0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.88■□□□□ 0.77
LSM4Q9Y4Z0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSM4Q9Y4Z0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.88■□□□□ 0.77
LSM4Q9Y4Z0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms