Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00588Q9Y4M8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00588Q9Y4M8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00588Q9Y4M8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00588Q9Y4M8 RARRES2P2-201ENST00000394842 485 ntBASIC17.34■□□□□ 0.37
LINC00588Q9Y4M8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00588Q9Y4M8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00588Q9Y4M8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.34■□□□□ 0.37
LINC00588Q9Y4M8 RNF126P1-201ENST00000567452 1320 ntBASIC17.34■□□□□ 0.37
LINC00588Q9Y4M8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
LINC00588Q9Y4M8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC00588Q9Y4M8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
LINC00588Q9Y4M8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.33■□□□□ 0.36
LINC00588Q9Y4M8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00588Q9Y4M8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LINC00588Q9Y4M8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00588Q9Y4M8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00588Q9Y4M8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00588Q9Y4M8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LINC00588Q9Y4M8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00588Q9Y4M8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC00588Q9Y4M8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC00588Q9Y4M8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.31■□□□□ 0.36
LINC00588Q9Y4M8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC00588Q9Y4M8 AP002414.2-202ENST00000590929 1450 ntBASIC17.31■□□□□ 0.36
LINC00588Q9Y4M8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00588Q9Y4M8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00588Q9Y4M8 AC060814.1-201ENST00000554326 538 ntBASIC17.3■□□□□ 0.36
LINC00588Q9Y4M8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00588Q9Y4M8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.3■□□□□ 0.36
LINC00588Q9Y4M8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.3■□□□□ 0.36
LINC00588Q9Y4M8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00588Q9Y4M8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00588Q9Y4M8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC00588Q9Y4M8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00588Q9Y4M8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LINC00588Q9Y4M8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00588Q9Y4M8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LINC00588Q9Y4M8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00588Q9Y4M8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC00588Q9Y4M8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LINC00588Q9Y4M8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC00588Q9Y4M8 AC126177.7-201ENST00000547904 679 ntBASIC17.28■□□□□ 0.36
LINC00588Q9Y4M8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LINC00588Q9Y4M8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
LINC00588Q9Y4M8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00588Q9Y4M8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00588Q9Y4M8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00588Q9Y4M8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC00588Q9Y4M8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00588Q9Y4M8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00588Q9Y4M8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00588Q9Y4M8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00588Q9Y4M8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00588Q9Y4M8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.26■□□□□ 0.35
LINC00588Q9Y4M8 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.26■□□□□ 0.35
LINC00588Q9Y4M8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00588Q9Y4M8 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.26■□□□□ 0.35
LINC00588Q9Y4M8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC17.26■□□□□ 0.35
LINC00588Q9Y4M8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00588Q9Y4M8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00588Q9Y4M8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00588Q9Y4M8 ABHD17AP5-201ENST00000580133 923 ntBASIC17.25■□□□□ 0.35
LINC00588Q9Y4M8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LINC00588Q9Y4M8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LINC00588Q9Y4M8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC00588Q9Y4M8 AC139426.1-201ENST00000568218 2529 ntBASIC17.24■□□□□ 0.35
LINC00588Q9Y4M8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LINC00588Q9Y4M8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00588Q9Y4M8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00588Q9Y4M8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC00588Q9Y4M8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00588Q9Y4M8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00588Q9Y4M8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00588Q9Y4M8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LINC00588Q9Y4M8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
LINC00588Q9Y4M8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00588Q9Y4M8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00588Q9Y4M8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00588Q9Y4M8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00588Q9Y4M8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00588Q9Y4M8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00588Q9Y4M8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00588Q9Y4M8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC00588Q9Y4M8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00588Q9Y4M8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00588Q9Y4M8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00588Q9Y4M8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00588Q9Y4M8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.21■□□□□ 0.35
LINC00588Q9Y4M8 AC092296.2-201ENST00000589470 999 ntBASIC17.21■□□□□ 0.35
LINC00588Q9Y4M8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LINC00588Q9Y4M8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00588Q9Y4M8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00588Q9Y4M8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00588Q9Y4M8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.2■□□□□ 0.34
LINC00588Q9Y4M8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00588Q9Y4M8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00588Q9Y4M8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00588Q9Y4M8 AL359258.2-201ENST00000564063 1566 ntBASIC17.19■□□□□ 0.34
LINC00588Q9Y4M8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms