Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
PCDHA7Q9UN72 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHA7Q9UN72 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHA7Q9UN72 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
PCDHA7Q9UN72 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHA7Q9UN72 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
PCDHA7Q9UN72 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PCDHA7Q9UN72 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
PCDHA7Q9UN72 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
PCDHA7Q9UN72 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
PCDHA7Q9UN72 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.64■■■□□ 2.17
PCDHA7Q9UN72 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
PCDHA7Q9UN72 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.62■■■□□ 2.17
PCDHA7Q9UN72 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.62■■■□□ 2.17
PCDHA7Q9UN72 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHA7Q9UN72 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.62■■■□□ 2.17
PCDHA7Q9UN72 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.61■■■□□ 2.17
PCDHA7Q9UN72 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHA7Q9UN72 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.61■■■□□ 2.17
PCDHA7Q9UN72 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHA7Q9UN72 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.61■■■□□ 2.17
PCDHA7Q9UN72 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.61■■■□□ 2.17
PCDHA7Q9UN72 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCDHA7Q9UN72 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.6■■■□□ 2.17
PCDHA7Q9UN72 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCDHA7Q9UN72 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.6■■■□□ 2.17
PCDHA7Q9UN72 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
PCDHA7Q9UN72 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
PCDHA7Q9UN72 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA7Q9UN72 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA7Q9UN72 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA7Q9UN72 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHA7Q9UN72 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHA7Q9UN72 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHA7Q9UN72 AC044849.2-201ENST00000606596 710 ntBASIC28.58■■■□□ 2.17
PCDHA7Q9UN72 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.58■■■□□ 2.17
PCDHA7Q9UN72 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.57■■■□□ 2.16
PCDHA7Q9UN72 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
PCDHA7Q9UN72 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.57■■■□□ 2.16
PCDHA7Q9UN72 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCDHA7Q9UN72 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCDHA7Q9UN72 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.56■■■□□ 2.16
PCDHA7Q9UN72 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHA7Q9UN72 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCDHA7Q9UN72 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
PCDHA7Q9UN72 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.53■■■□□ 2.16
PCDHA7Q9UN72 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHA7Q9UN72 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
PCDHA7Q9UN72 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHA7Q9UN72 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.53■■■□□ 2.16
PCDHA7Q9UN72 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHA7Q9UN72 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHA7Q9UN72 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHA7Q9UN72 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.16
PCDHA7Q9UN72 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
PCDHA7Q9UN72 AC110285.7-201ENST00000624417 1536 ntBASIC28.5■■■□□ 2.15
PCDHA7Q9UN72 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHA7Q9UN72 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHA7Q9UN72 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.5■■■□□ 2.15
PCDHA7Q9UN72 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.5■■■□□ 2.15
PCDHA7Q9UN72 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHA7Q9UN72 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.49■■■□□ 2.15
PCDHA7Q9UN72 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
PCDHA7Q9UN72 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PCDHA7Q9UN72 AC021231.2-201ENST00000594613 730 ntBASIC28.49■■■□□ 2.15
PCDHA7Q9UN72 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
PCDHA7Q9UN72 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
PCDHA7Q9UN72 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCDHA7Q9UN72 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PCDHA7Q9UN72 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
PCDHA7Q9UN72 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCDHA7Q9UN72 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.47■■■□□ 2.15
PCDHA7Q9UN72 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.47■■■□□ 2.15
PCDHA7Q9UN72 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.46■■■□□ 2.15
PCDHA7Q9UN72 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHA7Q9UN72 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.46■■■□□ 2.15
PCDHA7Q9UN72 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHA7Q9UN72 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHA7Q9UN72 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHA7Q9UN72 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
PCDHA7Q9UN72 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
PCDHA7Q9UN72 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDHA7Q9UN72 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDHA7Q9UN72 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
PCDHA7Q9UN72 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.43■■■□□ 2.14
PCDHA7Q9UN72 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCDHA7Q9UN72 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PCDHA7Q9UN72 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.42■■■□□ 2.14
PCDHA7Q9UN72 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PCDHA7Q9UN72 AC091060.1-201ENST00000623524 1766 ntBASIC28.42■■■□□ 2.14
PCDHA7Q9UN72 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.42■■■□□ 2.14
PCDHA7Q9UN72 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHA7Q9UN72 AL449106.1-201ENST00000608517 1980 ntBASIC28.41■■■□□ 2.14
PCDHA7Q9UN72 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.41■■■□□ 2.14
PCDHA7Q9UN72 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.41■■■□□ 2.14
PCDHA7Q9UN72 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHA7Q9UN72 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.39■■■□□ 2.14
PCDHA7Q9UN72 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
PCDHA7Q9UN72 DUX4L29-201ENST00000425409 679 ntBASIC28.39■■■□□ 2.14
PCDHA7Q9UN72 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms