Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.28■□□□□ 0.68
NOTCH3Q9UM47 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NOTCH3Q9UM47 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.28■□□□□ 0.68
NOTCH3Q9UM47 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NOTCH3Q9UM47 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NOTCH3Q9UM47 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.27■□□□□ 0.68
NOTCH3Q9UM47 ABCB10P1-201ENST00000614297 2181 ntBASIC19.27■□□□□ 0.68
NOTCH3Q9UM47 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NOTCH3Q9UM47 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NOTCH3Q9UM47 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.27■□□□□ 0.68
NOTCH3Q9UM47 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NOTCH3Q9UM47 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NOTCH3Q9UM47 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NOTCH3Q9UM47 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NOTCH3Q9UM47 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NOTCH3Q9UM47 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NOTCH3Q9UM47 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.26■□□□□ 0.67
NOTCH3Q9UM47 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.26■□□□□ 0.67
NOTCH3Q9UM47 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.26■□□□□ 0.67
NOTCH3Q9UM47 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NOTCH3Q9UM47 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NOTCH3Q9UM47 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
NOTCH3Q9UM47 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NOTCH3Q9UM47 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NOTCH3Q9UM47 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.25■□□□□ 0.67
NOTCH3Q9UM47 AC129492.7-201ENST00000622992 756 ntBASIC19.25■□□□□ 0.67
NOTCH3Q9UM47 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.24■□□□□ 0.67
NOTCH3Q9UM47 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NOTCH3Q9UM47 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH3Q9UM47 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH3Q9UM47 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NOTCH3Q9UM47 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
NOTCH3Q9UM47 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NOTCH3Q9UM47 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.23■□□□□ 0.67
NOTCH3Q9UM47 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
NOTCH3Q9UM47 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NOTCH3Q9UM47 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NOTCH3Q9UM47 AC139426.1-201ENST00000568218 2529 ntBASIC19.23■□□□□ 0.67
NOTCH3Q9UM47 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH3Q9UM47 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.22■□□□□ 0.67
NOTCH3Q9UM47 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH3Q9UM47 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NOTCH3Q9UM47 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH3Q9UM47 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH3Q9UM47 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH3Q9UM47 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH3Q9UM47 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NOTCH3Q9UM47 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH3Q9UM47 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH3Q9UM47 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH3Q9UM47 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
NOTCH3Q9UM47 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.2■□□□□ 0.66
NOTCH3Q9UM47 ECEL1P2-201ENST00000461596 1295 ntBASIC19.2■□□□□ 0.66
NOTCH3Q9UM47 AL157400.5-201ENST00000507624 621 ntBASIC19.2■□□□□ 0.66
NOTCH3Q9UM47 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.2■□□□□ 0.66
NOTCH3Q9UM47 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH3Q9UM47 AL451085.2-201ENST00000605085 799 ntBASIC19.2■□□□□ 0.66
NOTCH3Q9UM47 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH3Q9UM47 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NOTCH3Q9UM47 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.19■□□□□ 0.66
NOTCH3Q9UM47 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NOTCH3Q9UM47 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NOTCH3Q9UM47 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NOTCH3Q9UM47 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NOTCH3Q9UM47 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.19■□□□□ 0.66
NOTCH3Q9UM47 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.19■□□□□ 0.66
NOTCH3Q9UM47 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.19■□□□□ 0.66
NOTCH3Q9UM47 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NOTCH3Q9UM47 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NOTCH3Q9UM47 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH3Q9UM47 AC133552.2-201ENST00000619106 1032 ntBASIC19.18■□□□□ 0.66
NOTCH3Q9UM47 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
NOTCH3Q9UM47 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH3Q9UM47 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.18■□□□□ 0.66
NOTCH3Q9UM47 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH3Q9UM47 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH3Q9UM47 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NOTCH3Q9UM47 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.17■□□□□ 0.66
NOTCH3Q9UM47 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
NOTCH3Q9UM47 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.16■□□□□ 0.66
NOTCH3Q9UM47 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NOTCH3Q9UM47 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NOTCH3Q9UM47 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NOTCH3Q9UM47 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NOTCH3Q9UM47 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.16■□□□□ 0.66
NOTCH3Q9UM47 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NOTCH3Q9UM47 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NOTCH3Q9UM47 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.15■□□□□ 0.66
NOTCH3Q9UM47 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NOTCH3Q9UM47 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
NOTCH3Q9UM47 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NOTCH3Q9UM47 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.14■□□□□ 0.65
NOTCH3Q9UM47 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NOTCH3Q9UM47 RAP2CP1-202ENST00000605179 643 ntBASIC19.14■□□□□ 0.65
NOTCH3Q9UM47 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.14■□□□□ 0.65
NOTCH3Q9UM47 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.14■□□□□ 0.65
NOTCH3Q9UM47 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH3Q9UM47 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NOTCH3Q9UM47 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.13■□□□□ 0.65
NOTCH3Q9UM47 AL592295.1-201ENST00000400984 884 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms