Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CPSF2Q9P2I0 AP002414.2-202ENST00000590929 1450 ntBASIC25.06■■□□□ 1.6
CPSF2Q9P2I0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.06■■□□□ 1.6
CPSF2Q9P2I0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.06■■□□□ 1.6
CPSF2Q9P2I0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.05■■□□□ 1.6
CPSF2Q9P2I0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
CPSF2Q9P2I0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.05■■□□□ 1.6
CPSF2Q9P2I0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CPSF2Q9P2I0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPSF2Q9P2I0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPSF2Q9P2I0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CPSF2Q9P2I0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPSF2Q9P2I0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
CPSF2Q9P2I0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
CPSF2Q9P2I0 AC108673.1-201ENST00000510422 1159 ntBASIC25.03■■□□□ 1.6
CPSF2Q9P2I0 DUX4L28-201ENST00000623687 678 ntBASIC25.03■■□□□ 1.6
CPSF2Q9P2I0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.03■■□□□ 1.6
CPSF2Q9P2I0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CPSF2Q9P2I0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CPSF2Q9P2I0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CPSF2Q9P2I0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CPSF2Q9P2I0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CPSF2Q9P2I0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.6
CPSF2Q9P2I0 AC135983.2-203ENST00000454486 1613 ntBASIC25.01■■□□□ 1.59
CPSF2Q9P2I0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.01■■□□□ 1.59
CPSF2Q9P2I0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.01■■□□□ 1.59
CPSF2Q9P2I0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CPSF2Q9P2I0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25■■□□□ 1.59
CPSF2Q9P2I0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25■■□□□ 1.59
CPSF2Q9P2I0 MIR6090-201ENST00000622481 60 ntBASIC25■■□□□ 1.59
CPSF2Q9P2I0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25■■□□□ 1.59
CPSF2Q9P2I0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CPSF2Q9P2I0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CPSF2Q9P2I0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CPSF2Q9P2I0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CPSF2Q9P2I0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
CPSF2Q9P2I0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CPSF2Q9P2I0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.98■■□□□ 1.59
CPSF2Q9P2I0 WHAMMP2-203ENST00000563942 1603 ntBASIC24.98■■□□□ 1.59
CPSF2Q9P2I0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.98■■□□□ 1.59
CPSF2Q9P2I0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CPSF2Q9P2I0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CPSF2Q9P2I0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
CPSF2Q9P2I0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CPSF2Q9P2I0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CPSF2Q9P2I0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.97■■□□□ 1.59
CPSF2Q9P2I0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
CPSF2Q9P2I0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
CPSF2Q9P2I0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CPSF2Q9P2I0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.96■■□□□ 1.59
CPSF2Q9P2I0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CPSF2Q9P2I0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CPSF2Q9P2I0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.95■■□□□ 1.59
CPSF2Q9P2I0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
CPSF2Q9P2I0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.95■■□□□ 1.58
CPSF2Q9P2I0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.95■■□□□ 1.58
CPSF2Q9P2I0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CPSF2Q9P2I0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CPSF2Q9P2I0 MIR3665-201ENST00000578708 105 ntBASIC24.94■■□□□ 1.58
CPSF2Q9P2I0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.94■■□□□ 1.58
CPSF2Q9P2I0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CPSF2Q9P2I0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CPSF2Q9P2I0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CPSF2Q9P2I0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CPSF2Q9P2I0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
CPSF2Q9P2I0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.92■■□□□ 1.58
CPSF2Q9P2I0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.91■■□□□ 1.58
CPSF2Q9P2I0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CPSF2Q9P2I0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.91■■□□□ 1.58
CPSF2Q9P2I0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CPSF2Q9P2I0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.91■■□□□ 1.58
CPSF2Q9P2I0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CPSF2Q9P2I0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.9■■□□□ 1.58
CPSF2Q9P2I0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CPSF2Q9P2I0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CPSF2Q9P2I0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.89■■□□□ 1.58
CPSF2Q9P2I0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CPSF2Q9P2I0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
CPSF2Q9P2I0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.89■■□□□ 1.58
CPSF2Q9P2I0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CPSF2Q9P2I0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CPSF2Q9P2I0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.89■■□□□ 1.57
CPSF2Q9P2I0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
CPSF2Q9P2I0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
CPSF2Q9P2I0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
CPSF2Q9P2I0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CPSF2Q9P2I0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CPSF2Q9P2I0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CPSF2Q9P2I0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
CPSF2Q9P2I0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CPSF2Q9P2I0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.87■■□□□ 1.57
CPSF2Q9P2I0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.87■■□□□ 1.57
CPSF2Q9P2I0 LINC00273-201ENST00000539813 1452 ntBASIC24.87■■□□□ 1.57
CPSF2Q9P2I0 AC018358.1-201ENST00000631079 1402 ntBASIC24.86■■□□□ 1.57
CPSF2Q9P2I0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
CPSF2Q9P2I0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CPSF2Q9P2I0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CPSF2Q9P2I0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CPSF2Q9P2I0 AP006261.1-201ENST00000584783 668 ntBASIC24.86■■□□□ 1.57
CPSF2Q9P2I0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms