Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 U85056.1-201ENST00000616429 682 ntBASIC30.15■■■□□ 2.42
DDX4Q9NQI0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
DDX4Q9NQI0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.15■■■□□ 2.42
DDX4Q9NQI0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
DDX4Q9NQI0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
DDX4Q9NQI0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.13■■■□□ 2.41
DDX4Q9NQI0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.12■■■□□ 2.41
DDX4Q9NQI0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
DDX4Q9NQI0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.12■■■□□ 2.41
DDX4Q9NQI0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.12■■■□□ 2.41
DDX4Q9NQI0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.12■■■□□ 2.41
DDX4Q9NQI0 ABCB10P3-201ENST00000561950 2166 ntBASIC30.11■■■□□ 2.41
DDX4Q9NQI0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
DDX4Q9NQI0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.11■■■□□ 2.41
DDX4Q9NQI0 ABCB10P1-201ENST00000614297 2181 ntBASIC30.11■■■□□ 2.41
DDX4Q9NQI0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
DDX4Q9NQI0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
DDX4Q9NQI0 AL157400.5-201ENST00000507624 621 ntBASIC30.1■■■□□ 2.41
DDX4Q9NQI0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.1■■■□□ 2.41
DDX4Q9NQI0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
DDX4Q9NQI0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.1■■■□□ 2.41
DDX4Q9NQI0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
DDX4Q9NQI0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
DDX4Q9NQI0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.08■■■□□ 2.41
DDX4Q9NQI0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
DDX4Q9NQI0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
DDX4Q9NQI0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
DDX4Q9NQI0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.07■■■□□ 2.4
DDX4Q9NQI0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
DDX4Q9NQI0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
DDX4Q9NQI0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
DDX4Q9NQI0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.06■■■□□ 2.4
DDX4Q9NQI0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.06■■■□□ 2.4
DDX4Q9NQI0 ECEL1P2-201ENST00000461596 1295 ntBASIC30.06■■■□□ 2.4
DDX4Q9NQI0 AC012354.3-201ENST00000623734 483 ntBASIC30.06■■■□□ 2.4
DDX4Q9NQI0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
DDX4Q9NQI0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
DDX4Q9NQI0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
DDX4Q9NQI0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
DDX4Q9NQI0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.05■■■□□ 2.4
DDX4Q9NQI0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
DDX4Q9NQI0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.04■■■□□ 2.4
DDX4Q9NQI0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
DDX4Q9NQI0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
DDX4Q9NQI0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
DDX4Q9NQI0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
DDX4Q9NQI0 AC018358.1-201ENST00000631079 1402 ntBASIC30.03■■■□□ 2.4
DDX4Q9NQI0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.03■■■□□ 2.4
DDX4Q9NQI0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
DDX4Q9NQI0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.03■■■□□ 2.4
DDX4Q9NQI0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
DDX4Q9NQI0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC30.02■■■□□ 2.4
DDX4Q9NQI0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.02■■■□□ 2.4
DDX4Q9NQI0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC30.01■■■□□ 2.39
DDX4Q9NQI0 AC126177.7-201ENST00000547904 679 ntBASIC30.01■■■□□ 2.39
DDX4Q9NQI0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
DDX4Q9NQI0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
DDX4Q9NQI0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC30■■■□□ 2.39
DDX4Q9NQI0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30■■■□□ 2.39
DDX4Q9NQI0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
DDX4Q9NQI0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
DDX4Q9NQI0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
DDX4Q9NQI0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
DDX4Q9NQI0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
DDX4Q9NQI0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
DDX4Q9NQI0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.98■■■□□ 2.39
DDX4Q9NQI0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.98■■■□□ 2.39
DDX4Q9NQI0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.97■■■□□ 2.39
DDX4Q9NQI0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
DDX4Q9NQI0 KRT18P60-201ENST00000312876 1297 ntBASIC29.96■■■□□ 2.39
DDX4Q9NQI0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
DDX4Q9NQI0 AL033527.3-201ENST00000566366 1196 ntBASIC29.96■■■□□ 2.39
DDX4Q9NQI0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
DDX4Q9NQI0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
DDX4Q9NQI0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.95■■■□□ 2.39
DDX4Q9NQI0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC29.95■■■□□ 2.39
DDX4Q9NQI0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
DDX4Q9NQI0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.94■■■□□ 2.38
DDX4Q9NQI0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
DDX4Q9NQI0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
DDX4Q9NQI0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
DDX4Q9NQI0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
DDX4Q9NQI0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
DDX4Q9NQI0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.93■■■□□ 2.38
DDX4Q9NQI0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
DDX4Q9NQI0 AL359258.2-201ENST00000564063 1566 ntBASIC29.93■■■□□ 2.38
DDX4Q9NQI0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
DDX4Q9NQI0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
DDX4Q9NQI0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC29.92■■■□□ 2.38
DDX4Q9NQI0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
DDX4Q9NQI0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
DDX4Q9NQI0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
DDX4Q9NQI0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
DDX4Q9NQI0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
DDX4Q9NQI0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
DDX4Q9NQI0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
DDX4Q9NQI0 AP002414.2-202ENST00000590929 1450 ntBASIC29.9■■■□□ 2.38
DDX4Q9NQI0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
DDX4Q9NQI0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
DDX4Q9NQI0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms