Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.02■□□□□ 0.96
Q9N2K0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Q9N2K0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Q9N2K0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q9N2K0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q9N2K0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Q9N2K0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q9N2K0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Q9N2K0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q9N2K0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q9N2K0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21■□□□□ 0.95
Q9N2K0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21■□□□□ 0.95
Q9N2K0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Q9N2K0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21■□□□□ 0.95
Q9N2K0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Q9N2K0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21■□□□□ 0.95
Q9N2K0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21■□□□□ 0.95
Q9N2K0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q9N2K0 MIR3665-201ENST00000578708 105 ntBASIC20.99■□□□□ 0.95
Q9N2K0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Q9N2K0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.99■□□□□ 0.95
Q9N2K0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Q9N2K0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.98■□□□□ 0.95
Q9N2K0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Q9N2K0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.98■□□□□ 0.95
Q9N2K0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q9N2K0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q9N2K0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q9N2K0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Q9N2K0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q9N2K0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.97■□□□□ 0.95
Q9N2K0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q9N2K0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Q9N2K0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Q9N2K0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q9N2K0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.95■□□□□ 0.94
Q9N2K0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Q9N2K0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.94■□□□□ 0.94
Q9N2K0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Q9N2K0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Q9N2K0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q9N2K0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.94■□□□□ 0.94
Q9N2K0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q9N2K0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q9N2K0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q9N2K0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q9N2K0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q9N2K0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.93■□□□□ 0.94
Q9N2K0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Q9N2K0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.93■□□□□ 0.94
Q9N2K0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Q9N2K0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.93■□□□□ 0.94
Q9N2K0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.93■□□□□ 0.94
Q9N2K0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Q9N2K0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.92■□□□□ 0.94
Q9N2K0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.92■□□□□ 0.94
Q9N2K0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q9N2K0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Q9N2K0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.91■□□□□ 0.94
Q9N2K0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Q9N2K0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Q9N2K0 AP006261.1-201ENST00000584783 668 ntBASIC20.91■□□□□ 0.94
Q9N2K0 AL449106.1-201ENST00000608517 1980 ntBASIC20.9■□□□□ 0.94
Q9N2K0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q9N2K0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q9N2K0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q9N2K0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Q9N2K0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q9N2K0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.9■□□□□ 0.94
Q9N2K0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.9■□□□□ 0.94
Q9N2K0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q9N2K0 AC091060.1-201ENST00000623524 1766 ntBASIC20.9■□□□□ 0.94
Q9N2K0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Q9N2K0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Q9N2K0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Q9N2K0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.89■□□□□ 0.93
Q9N2K0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.89■□□□□ 0.93
Q9N2K0 AC135731.1-201ENST00000569415 2548 ntBASIC20.89■□□□□ 0.93
Q9N2K0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
Q9N2K0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9N2K0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Q9N2K0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.88■□□□□ 0.93
Q9N2K0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9N2K0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.87■□□□□ 0.93
Q9N2K0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.87■□□□□ 0.93
Q9N2K0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Q9N2K0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Q9N2K0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Q9N2K0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Q9N2K0 AC087741.3-201ENST00000624270 1347 ntBASIC20.84■□□□□ 0.93
Q9N2K0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Q9N2K0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Q9N2K0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Q9N2K0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.83■□□□□ 0.92
Q9N2K0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Q9N2K0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Q9N2K0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q9N2K0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Q9N2K0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q9N2K0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms