Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HES4Q9HCC6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.23■□□□□ 0.99
HES4Q9HCC6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.23■□□□□ 0.99
HES4Q9HCC6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HES4Q9HCC6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HES4Q9HCC6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HES4Q9HCC6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HES4Q9HCC6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.23■□□□□ 0.99
HES4Q9HCC6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HES4Q9HCC6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HES4Q9HCC6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HES4Q9HCC6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HES4Q9HCC6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HES4Q9HCC6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HES4Q9HCC6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HES4Q9HCC6 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.21■□□□□ 0.99
HES4Q9HCC6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
HES4Q9HCC6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HES4Q9HCC6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HES4Q9HCC6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HES4Q9HCC6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
HES4Q9HCC6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.2■□□□□ 0.98
HES4Q9HCC6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HES4Q9HCC6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
HES4Q9HCC6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
HES4Q9HCC6 ZNRF2P2-203ENST00000454624 420 ntBASIC21.19■□□□□ 0.98
HES4Q9HCC6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HES4Q9HCC6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HES4Q9HCC6 DUX4L13-201ENST00000554103 1267 ntBASIC21.18■□□□□ 0.98
HES4Q9HCC6 DUX4L15-201ENST00000611059 1267 ntBASIC21.18■□□□□ 0.98
HES4Q9HCC6 DUX4L23-201ENST00000615195 1269 ntBASIC21.18■□□□□ 0.98
HES4Q9HCC6 DUX4L24-201ENST00000617576 1269 ntBASIC21.18■□□□□ 0.98
HES4Q9HCC6 DUX4L22-201ENST00000618238 1269 ntBASIC21.18■□□□□ 0.98
HES4Q9HCC6 DUX4L20-201ENST00000619712 1269 ntBASIC21.18■□□□□ 0.98
HES4Q9HCC6 DUX4L21-201ENST00000622058 1269 ntBASIC21.18■□□□□ 0.98
HES4Q9HCC6 DUX4L10-201ENST00000622460 1267 ntBASIC21.18■□□□□ 0.98
HES4Q9HCC6 DUX4L25-201ENST00000624915 1269 ntBASIC21.18■□□□□ 0.98
HES4Q9HCC6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HES4Q9HCC6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
HES4Q9HCC6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HES4Q9HCC6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HES4Q9HCC6 AL121749.1-202ENST00000609313 2153 ntBASIC21.17■□□□□ 0.98
HES4Q9HCC6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HES4Q9HCC6 DUX4L11-201ENST00000611504 1267 ntBASIC21.17■□□□□ 0.98
HES4Q9HCC6 DUX4L12-201ENST00000614593 1267 ntBASIC21.17■□□□□ 0.98
HES4Q9HCC6 DUX4L14-201ENST00000621227 1267 ntBASIC21.17■□□□□ 0.98
HES4Q9HCC6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HES4Q9HCC6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HES4Q9HCC6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HES4Q9HCC6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HES4Q9HCC6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HES4Q9HCC6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
HES4Q9HCC6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.16■□□□□ 0.98
HES4Q9HCC6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.16■□□□□ 0.98
HES4Q9HCC6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HES4Q9HCC6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.15■□□□□ 0.98
HES4Q9HCC6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HES4Q9HCC6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HES4Q9HCC6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HES4Q9HCC6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HES4Q9HCC6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HES4Q9HCC6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HES4Q9HCC6 ABHD17AP4-201ENST00000411545 909 ntBASIC21.13■□□□□ 0.97
HES4Q9HCC6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HES4Q9HCC6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HES4Q9HCC6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HES4Q9HCC6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HES4Q9HCC6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HES4Q9HCC6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.12■□□□□ 0.97
HES4Q9HCC6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HES4Q9HCC6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
HES4Q9HCC6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HES4Q9HCC6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HES4Q9HCC6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HES4Q9HCC6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HES4Q9HCC6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HES4Q9HCC6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HES4Q9HCC6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.1■□□□□ 0.97
HES4Q9HCC6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HES4Q9HCC6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.1■□□□□ 0.97
HES4Q9HCC6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HES4Q9HCC6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HES4Q9HCC6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
HES4Q9HCC6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HES4Q9HCC6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HES4Q9HCC6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HES4Q9HCC6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.08■□□□□ 0.97
HES4Q9HCC6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.08■□□□□ 0.97
HES4Q9HCC6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.08■□□□□ 0.97
HES4Q9HCC6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HES4Q9HCC6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HES4Q9HCC6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.07■□□□□ 0.96
HES4Q9HCC6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HES4Q9HCC6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HES4Q9HCC6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HES4Q9HCC6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HES4Q9HCC6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HES4Q9HCC6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HES4Q9HCC6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HES4Q9HCC6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms