Protein–RNA interactions for Protein: Q9H4Q3

PRDM13, PR domain zinc finger protein 13, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13Q9H4Q3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.65■□□□□ 0.9
PRDM13Q9H4Q3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM13Q9H4Q3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PRDM13Q9H4Q3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PRDM13Q9H4Q3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.64■□□□□ 0.9
PRDM13Q9H4Q3 RNF126P1-201ENST00000567452 1320 ntBASIC20.64■□□□□ 0.89
PRDM13Q9H4Q3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PRDM13Q9H4Q3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PRDM13Q9H4Q3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM13Q9H4Q3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM13Q9H4Q3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.63■□□□□ 0.89
PRDM13Q9H4Q3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.63■□□□□ 0.89
PRDM13Q9H4Q3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM13Q9H4Q3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM13Q9H4Q3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.62■□□□□ 0.89
PRDM13Q9H4Q3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM13Q9H4Q3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.62■□□□□ 0.89
PRDM13Q9H4Q3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.61■□□□□ 0.89
PRDM13Q9H4Q3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM13Q9H4Q3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM13Q9H4Q3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM13Q9H4Q3 AC148477.6-201ENST00000623746 465 ntBASIC20.61■□□□□ 0.89
PRDM13Q9H4Q3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM13Q9H4Q3 AC110285.7-201ENST00000624417 1536 ntBASIC20.61■□□□□ 0.89
PRDM13Q9H4Q3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM13Q9H4Q3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.6■□□□□ 0.89
PRDM13Q9H4Q3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM13Q9H4Q3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM13Q9H4Q3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM13Q9H4Q3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM13Q9H4Q3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM13Q9H4Q3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM13Q9H4Q3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
PRDM13Q9H4Q3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.59■□□□□ 0.89
PRDM13Q9H4Q3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM13Q9H4Q3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM13Q9H4Q3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM13Q9H4Q3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.59■□□□□ 0.89
PRDM13Q9H4Q3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.59■□□□□ 0.89
PRDM13Q9H4Q3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM13Q9H4Q3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM13Q9H4Q3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM13Q9H4Q3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
PRDM13Q9H4Q3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRDM13Q9H4Q3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PRDM13Q9H4Q3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRDM13Q9H4Q3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM13Q9H4Q3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM13Q9H4Q3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM13Q9H4Q3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM13Q9H4Q3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM13Q9H4Q3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.57■□□□□ 0.88
PRDM13Q9H4Q3 ABHD17AP5-201ENST00000580133 923 ntBASIC20.57■□□□□ 0.88
PRDM13Q9H4Q3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.57■□□□□ 0.88
PRDM13Q9H4Q3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM13Q9H4Q3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM13Q9H4Q3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM13Q9H4Q3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.57■□□□□ 0.88
PRDM13Q9H4Q3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.57■□□□□ 0.88
PRDM13Q9H4Q3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM13Q9H4Q3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PRDM13Q9H4Q3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM13Q9H4Q3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.56■□□□□ 0.88
PRDM13Q9H4Q3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.56■□□□□ 0.88
PRDM13Q9H4Q3 AC022413.1-201ENST00000624602 984 ntBASIC20.56■□□□□ 0.88
PRDM13Q9H4Q3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM13Q9H4Q3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PRDM13Q9H4Q3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.55■□□□□ 0.88
PRDM13Q9H4Q3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM13Q9H4Q3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM13Q9H4Q3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
PRDM13Q9H4Q3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM13Q9H4Q3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PRDM13Q9H4Q3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM13Q9H4Q3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM13Q9H4Q3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.54■□□□□ 0.88
PRDM13Q9H4Q3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM13Q9H4Q3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PRDM13Q9H4Q3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM13Q9H4Q3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM13Q9H4Q3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PRDM13Q9H4Q3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.54■□□□□ 0.88
PRDM13Q9H4Q3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM13Q9H4Q3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PRDM13Q9H4Q3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.52■□□□□ 0.88
PRDM13Q9H4Q3 AP004833.2-201ENST00000532228 1454 ntBASIC20.52■□□□□ 0.88
PRDM13Q9H4Q3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.52■□□□□ 0.88
PRDM13Q9H4Q3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM13Q9H4Q3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.52■□□□□ 0.88
PRDM13Q9H4Q3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PRDM13Q9H4Q3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM13Q9H4Q3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM13Q9H4Q3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM13Q9H4Q3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PRDM13Q9H4Q3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.51■□□□□ 0.87
PRDM13Q9H4Q3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM13Q9H4Q3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRDM13Q9H4Q3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
PRDM13Q9H4Q3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRDM13Q9H4Q3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms