Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ATXN3LQ9H3M9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
ATXN3LQ9H3M9 AC060814.1-201ENST00000554326 538 ntBASIC26.56■■□□□ 1.84
ATXN3LQ9H3M9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
ATXN3LQ9H3M9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.54■■□□□ 1.84
ATXN3LQ9H3M9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.54■■□□□ 1.84
ATXN3LQ9H3M9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
ATXN3LQ9H3M9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ATXN3LQ9H3M9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
ATXN3LQ9H3M9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
ATXN3LQ9H3M9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
ATXN3LQ9H3M9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
ATXN3LQ9H3M9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
ATXN3LQ9H3M9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
ATXN3LQ9H3M9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.51■■□□□ 1.84
ATXN3LQ9H3M9 AC100797.4-201ENST00000631653 1827 ntBASIC26.51■■□□□ 1.83
ATXN3LQ9H3M9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ATXN3LQ9H3M9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ATXN3LQ9H3M9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
ATXN3LQ9H3M9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
ATXN3LQ9H3M9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
ATXN3LQ9H3M9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
ATXN3LQ9H3M9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
ATXN3LQ9H3M9 NTF6A-201ENST00000591175 560 ntBASIC26.48■■□□□ 1.83
ATXN3LQ9H3M9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
ATXN3LQ9H3M9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
ATXN3LQ9H3M9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.47■■□□□ 1.83
ATXN3LQ9H3M9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ATXN3LQ9H3M9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.46■■□□□ 1.83
ATXN3LQ9H3M9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ATXN3LQ9H3M9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ATXN3LQ9H3M9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
ATXN3LQ9H3M9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
ATXN3LQ9H3M9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.45■■□□□ 1.82
ATXN3LQ9H3M9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.45■■□□□ 1.82
ATXN3LQ9H3M9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ATXN3LQ9H3M9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ATXN3LQ9H3M9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.44■■□□□ 1.82
ATXN3LQ9H3M9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.44■■□□□ 1.82
ATXN3LQ9H3M9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ATXN3LQ9H3M9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
ATXN3LQ9H3M9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ATXN3LQ9H3M9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ATXN3LQ9H3M9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ATXN3LQ9H3M9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
ATXN3LQ9H3M9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
ATXN3LQ9H3M9 AC126177.7-201ENST00000547904 679 ntBASIC26.43■■□□□ 1.82
ATXN3LQ9H3M9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
ATXN3LQ9H3M9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.42■■□□□ 1.82
ATXN3LQ9H3M9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ATXN3LQ9H3M9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ATXN3LQ9H3M9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ATXN3LQ9H3M9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.4■■□□□ 1.82
ATXN3LQ9H3M9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.4■■□□□ 1.82
ATXN3LQ9H3M9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.4■■□□□ 1.82
ATXN3LQ9H3M9 AC092296.2-201ENST00000589470 999 ntBASIC26.4■■□□□ 1.82
ATXN3LQ9H3M9 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.39■■□□□ 1.82
ATXN3LQ9H3M9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ATXN3LQ9H3M9 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.39■■□□□ 1.82
ATXN3LQ9H3M9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.39■■□□□ 1.81
ATXN3LQ9H3M9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
ATXN3LQ9H3M9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
ATXN3LQ9H3M9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.38■■□□□ 1.81
ATXN3LQ9H3M9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.37■■□□□ 1.81
ATXN3LQ9H3M9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.37■■□□□ 1.81
ATXN3LQ9H3M9 AC012354.3-201ENST00000623734 483 ntBASIC26.37■■□□□ 1.81
ATXN3LQ9H3M9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ATXN3LQ9H3M9 AL139393.2-201ENST00000608721 2025 ntBASIC26.37■■□□□ 1.81
ATXN3LQ9H3M9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ATXN3LQ9H3M9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.37■■□□□ 1.81
ATXN3LQ9H3M9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.36■■□□□ 1.81
ATXN3LQ9H3M9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.36■■□□□ 1.81
ATXN3LQ9H3M9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ATXN3LQ9H3M9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.35■■□□□ 1.81
ATXN3LQ9H3M9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ATXN3LQ9H3M9 ECEL1P2-201ENST00000461596 1295 ntBASIC26.35■■□□□ 1.81
ATXN3LQ9H3M9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ATXN3LQ9H3M9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.35■■□□□ 1.81
ATXN3LQ9H3M9 U85056.1-201ENST00000616429 682 ntBASIC26.35■■□□□ 1.81
ATXN3LQ9H3M9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.34■■□□□ 1.81
ATXN3LQ9H3M9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATXN3LQ9H3M9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATXN3LQ9H3M9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ATXN3LQ9H3M9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATXN3LQ9H3M9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.34■■□□□ 1.81
ATXN3LQ9H3M9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
ATXN3LQ9H3M9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ATXN3LQ9H3M9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
ATXN3LQ9H3M9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.33■■□□□ 1.81
ATXN3LQ9H3M9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATXN3LQ9H3M9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.33■■□□□ 1.81
ATXN3LQ9H3M9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.33■■□□□ 1.81
ATXN3LQ9H3M9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATXN3LQ9H3M9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
ATXN3LQ9H3M9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ATXN3LQ9H3M9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATXN3LQ9H3M9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ATXN3LQ9H3M9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ATXN3LQ9H3M9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ATXN3LQ9H3M9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms