Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC38A1Q9H2H9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC38A1Q9H2H9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC38A1Q9H2H9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
SLC38A1Q9H2H9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLC38A1Q9H2H9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
SLC38A1Q9H2H9 AC110285.7-201ENST00000624417 1536 ntBASIC23.3■■□□□ 1.32
SLC38A1Q9H2H9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.3■■□□□ 1.32
SLC38A1Q9H2H9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SLC38A1Q9H2H9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
SLC38A1Q9H2H9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.29■■□□□ 1.32
SLC38A1Q9H2H9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC38A1Q9H2H9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
SLC38A1Q9H2H9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SLC38A1Q9H2H9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.27■■□□□ 1.32
SLC38A1Q9H2H9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC38A1Q9H2H9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC38A1Q9H2H9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC38A1Q9H2H9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC38A1Q9H2H9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
SLC38A1Q9H2H9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC38A1Q9H2H9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC38A1Q9H2H9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC38A1Q9H2H9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.25■■□□□ 1.31
SLC38A1Q9H2H9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC38A1Q9H2H9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
SLC38A1Q9H2H9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC38A1Q9H2H9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC38A1Q9H2H9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC38A1Q9H2H9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.23■■□□□ 1.31
SLC38A1Q9H2H9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC38A1Q9H2H9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC38A1Q9H2H9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC38A1Q9H2H9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.22■■□□□ 1.31
SLC38A1Q9H2H9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC38A1Q9H2H9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SLC38A1Q9H2H9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SLC38A1Q9H2H9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.21■■□□□ 1.31
SLC38A1Q9H2H9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SLC38A1Q9H2H9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SLC38A1Q9H2H9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
SLC38A1Q9H2H9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.2■■□□□ 1.3
SLC38A1Q9H2H9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.19■■□□□ 1.3
SLC38A1Q9H2H9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC38A1Q9H2H9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
SLC38A1Q9H2H9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
SLC38A1Q9H2H9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.18■■□□□ 1.3
SLC38A1Q9H2H9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.18■■□□□ 1.3
SLC38A1Q9H2H9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
SLC38A1Q9H2H9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SLC38A1Q9H2H9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.17■■□□□ 1.3
SLC38A1Q9H2H9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC38A1Q9H2H9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC38A1Q9H2H9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SLC38A1Q9H2H9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC38A1Q9H2H9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC38A1Q9H2H9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SLC38A1Q9H2H9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.14■■□□□ 1.29
SLC38A1Q9H2H9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.14■■□□□ 1.29
SLC38A1Q9H2H9 LINC01971-201ENST00000617888 1048 ntBASIC23.14■■□□□ 1.29
SLC38A1Q9H2H9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC38A1Q9H2H9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.13■■□□□ 1.29
SLC38A1Q9H2H9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC38A1Q9H2H9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC38A1Q9H2H9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC38A1Q9H2H9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.13■■□□□ 1.29
SLC38A1Q9H2H9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC38A1Q9H2H9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SLC38A1Q9H2H9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC38A1Q9H2H9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC38A1Q9H2H9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SLC38A1Q9H2H9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.12■■□□□ 1.29
SLC38A1Q9H2H9 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC38A1Q9H2H9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC38A1Q9H2H9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms