Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SH3RF2Q8TEC5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.31■■□□□ 1.8
SH3RF2Q8TEC5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
SH3RF2Q8TEC5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SH3RF2Q8TEC5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SH3RF2Q8TEC5 AC060814.1-201ENST00000554326 538 ntBASIC26.3■■□□□ 1.8
SH3RF2Q8TEC5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SH3RF2Q8TEC5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.29■■□□□ 1.8
SH3RF2Q8TEC5 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
SH3RF2Q8TEC5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.29■■□□□ 1.8
SH3RF2Q8TEC5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.28■■□□□ 1.8
SH3RF2Q8TEC5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SH3RF2Q8TEC5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
SH3RF2Q8TEC5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SH3RF2Q8TEC5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SH3RF2Q8TEC5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SH3RF2Q8TEC5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.26■■□□□ 1.79
SH3RF2Q8TEC5 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SH3RF2Q8TEC5 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SH3RF2Q8TEC5 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SH3RF2Q8TEC5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.25■■□□□ 1.79
SH3RF2Q8TEC5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SH3RF2Q8TEC5 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.25■■□□□ 1.79
SH3RF2Q8TEC5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
SH3RF2Q8TEC5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SH3RF2Q8TEC5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SH3RF2Q8TEC5 AL139393.2-201ENST00000608721 2025 ntBASIC26.24■■□□□ 1.79
SH3RF2Q8TEC5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SH3RF2Q8TEC5 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SH3RF2Q8TEC5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.22■■□□□ 1.79
SH3RF2Q8TEC5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SH3RF2Q8TEC5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.21■■□□□ 1.79
SH3RF2Q8TEC5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SH3RF2Q8TEC5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SH3RF2Q8TEC5 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
SH3RF2Q8TEC5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SH3RF2Q8TEC5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.2■■□□□ 1.78
SH3RF2Q8TEC5 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
SH3RF2Q8TEC5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SH3RF2Q8TEC5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SH3RF2Q8TEC5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SH3RF2Q8TEC5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SH3RF2Q8TEC5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.19■■□□□ 1.78
SH3RF2Q8TEC5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.19■■□□□ 1.78
SH3RF2Q8TEC5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SH3RF2Q8TEC5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
SH3RF2Q8TEC5 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.18■■□□□ 1.78
SH3RF2Q8TEC5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SH3RF2Q8TEC5 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.18■■□□□ 1.78
SH3RF2Q8TEC5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.18■■□□□ 1.78
SH3RF2Q8TEC5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.18■■□□□ 1.78
SH3RF2Q8TEC5 AC092296.2-201ENST00000589470 999 ntBASIC26.17■■□□□ 1.78
SH3RF2Q8TEC5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.17■■□□□ 1.78
SH3RF2Q8TEC5 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SH3RF2Q8TEC5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SH3RF2Q8TEC5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
SH3RF2Q8TEC5 AC126177.7-201ENST00000547904 679 ntBASIC26.16■■□□□ 1.78
SH3RF2Q8TEC5 NTF6A-201ENST00000591175 560 ntBASIC26.16■■□□□ 1.78
SH3RF2Q8TEC5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SH3RF2Q8TEC5 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
SH3RF2Q8TEC5 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SH3RF2Q8TEC5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SH3RF2Q8TEC5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SH3RF2Q8TEC5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.15■■□□□ 1.78
SH3RF2Q8TEC5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SH3RF2Q8TEC5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
SH3RF2Q8TEC5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SH3RF2Q8TEC5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.14■■□□□ 1.78
SH3RF2Q8TEC5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.14■■□□□ 1.78
SH3RF2Q8TEC5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.14■■□□□ 1.78
SH3RF2Q8TEC5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SH3RF2Q8TEC5 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.13■■□□□ 1.77
SH3RF2Q8TEC5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.13■■□□□ 1.77
SH3RF2Q8TEC5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
SH3RF2Q8TEC5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.11■■□□□ 1.77
SH3RF2Q8TEC5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SH3RF2Q8TEC5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.11■■□□□ 1.77
SH3RF2Q8TEC5 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SH3RF2Q8TEC5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
SH3RF2Q8TEC5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SH3RF2Q8TEC5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SH3RF2Q8TEC5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SH3RF2Q8TEC5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SH3RF2Q8TEC5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
SH3RF2Q8TEC5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.09■■□□□ 1.77
SH3RF2Q8TEC5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.09■■□□□ 1.77
SH3RF2Q8TEC5 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SH3RF2Q8TEC5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SH3RF2Q8TEC5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.09■■□□□ 1.77
SH3RF2Q8TEC5 ECEL1P2-201ENST00000461596 1295 ntBASIC26.09■■□□□ 1.77
SH3RF2Q8TEC5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
SH3RF2Q8TEC5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.09■■□□□ 1.77
SH3RF2Q8TEC5 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.08■■□□□ 1.77
SH3RF2Q8TEC5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.08■■□□□ 1.77
SH3RF2Q8TEC5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SH3RF2Q8TEC5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SH3RF2Q8TEC5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SH3RF2Q8TEC5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SH3RF2Q8TEC5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.06■■□□□ 1.76
SH3RF2Q8TEC5 U85056.1-201ENST00000616429 682 ntBASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms