Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 DUX4L15-201ENST00000611059 1267 ntBASIC24.98■■□□□ 1.59
PHC3Q8NDX5 DUX4L23-201ENST00000615195 1269 ntBASIC24.98■■□□□ 1.59
PHC3Q8NDX5 DUX4L24-201ENST00000617576 1269 ntBASIC24.98■■□□□ 1.59
PHC3Q8NDX5 DUX4L22-201ENST00000618238 1269 ntBASIC24.98■■□□□ 1.59
PHC3Q8NDX5 DUX4L20-201ENST00000619712 1269 ntBASIC24.98■■□□□ 1.59
PHC3Q8NDX5 DUX4L21-201ENST00000622058 1269 ntBASIC24.98■■□□□ 1.59
PHC3Q8NDX5 DUX4L10-201ENST00000622460 1267 ntBASIC24.98■■□□□ 1.59
PHC3Q8NDX5 DUX4L25-201ENST00000624915 1269 ntBASIC24.98■■□□□ 1.59
PHC3Q8NDX5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.98■■□□□ 1.59
PHC3Q8NDX5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.98■■□□□ 1.59
PHC3Q8NDX5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PHC3Q8NDX5 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
PHC3Q8NDX5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PHC3Q8NDX5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PHC3Q8NDX5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PHC3Q8NDX5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.95■■□□□ 1.58
PHC3Q8NDX5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.95■■□□□ 1.58
PHC3Q8NDX5 MIR3648-2-201ENST00000581792 180 ntBASIC24.95■■□□□ 1.58
PHC3Q8NDX5 MIR3648-1-201ENST00000615959 180 ntBASIC24.95■■□□□ 1.58
PHC3Q8NDX5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.95■■□□□ 1.58
PHC3Q8NDX5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.95■■□□□ 1.58
PHC3Q8NDX5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.95■■□□□ 1.58
PHC3Q8NDX5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PHC3Q8NDX5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
PHC3Q8NDX5 AC016575.1-201ENST00000607026 382 ntBASIC24.94■■□□□ 1.58
PHC3Q8NDX5 CR559946.2-201ENST00000623684 991 ntBASIC24.94■■□□□ 1.58
PHC3Q8NDX5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.94■■□□□ 1.58
PHC3Q8NDX5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PHC3Q8NDX5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.94■■□□□ 1.58
PHC3Q8NDX5 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
PHC3Q8NDX5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PHC3Q8NDX5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PHC3Q8NDX5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PHC3Q8NDX5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PHC3Q8NDX5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PHC3Q8NDX5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.92■■□□□ 1.58
PHC3Q8NDX5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.92■■□□□ 1.58
PHC3Q8NDX5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.92■■□□□ 1.58
PHC3Q8NDX5 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
PHC3Q8NDX5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.91■■□□□ 1.58
PHC3Q8NDX5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.91■■□□□ 1.58
PHC3Q8NDX5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PHC3Q8NDX5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PHC3Q8NDX5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PHC3Q8NDX5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
PHC3Q8NDX5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.9■■□□□ 1.58
PHC3Q8NDX5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PHC3Q8NDX5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PHC3Q8NDX5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PHC3Q8NDX5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
PHC3Q8NDX5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PHC3Q8NDX5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
PHC3Q8NDX5 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.89■■□□□ 1.58
PHC3Q8NDX5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.89■■□□□ 1.58
PHC3Q8NDX5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
PHC3Q8NDX5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.88■■□□□ 1.57
PHC3Q8NDX5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PHC3Q8NDX5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.88■■□□□ 1.57
PHC3Q8NDX5 AC110285.7-201ENST00000624417 1536 ntBASIC24.87■■□□□ 1.57
PHC3Q8NDX5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.87■■□□□ 1.57
PHC3Q8NDX5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.87■■□□□ 1.57
PHC3Q8NDX5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PHC3Q8NDX5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.87■■□□□ 1.57
PHC3Q8NDX5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
PHC3Q8NDX5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
PHC3Q8NDX5 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PHC3Q8NDX5 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PHC3Q8NDX5 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
PHC3Q8NDX5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.86■■□□□ 1.57
PHC3Q8NDX5 HLA-V-202ENST00000446817 847 ntBASIC24.86■■□□□ 1.57
PHC3Q8NDX5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
PHC3Q8NDX5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.85■■□□□ 1.57
PHC3Q8NDX5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
PHC3Q8NDX5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PHC3Q8NDX5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PHC3Q8NDX5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PHC3Q8NDX5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PHC3Q8NDX5 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.84■■□□□ 1.57
PHC3Q8NDX5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PHC3Q8NDX5 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PHC3Q8NDX5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
PHC3Q8NDX5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
PHC3Q8NDX5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PHC3Q8NDX5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PHC3Q8NDX5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PHC3Q8NDX5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PHC3Q8NDX5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
PHC3Q8NDX5 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
PHC3Q8NDX5 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PHC3Q8NDX5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PHC3Q8NDX5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PHC3Q8NDX5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PHC3Q8NDX5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PHC3Q8NDX5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
PHC3Q8NDX5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
PHC3Q8NDX5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PHC3Q8NDX5 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PHC3Q8NDX5 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PHC3Q8NDX5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
PHC3Q8NDX5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms