Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SLC17A8Q8NDX2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SLC17A8Q8NDX2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
SLC17A8Q8NDX2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SLC17A8Q8NDX2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.34■■■□□ 2.13
SLC17A8Q8NDX2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
SLC17A8Q8NDX2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
SLC17A8Q8NDX2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SLC17A8Q8NDX2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.32■■■□□ 2.12
SLC17A8Q8NDX2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SLC17A8Q8NDX2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SLC17A8Q8NDX2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
SLC17A8Q8NDX2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.3■■■□□ 2.12
SLC17A8Q8NDX2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SLC17A8Q8NDX2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
SLC17A8Q8NDX2 WHAMMP2-203ENST00000563942 1603 ntBASIC28.3■■■□□ 2.12
SLC17A8Q8NDX2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SLC17A8Q8NDX2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.3■■■□□ 2.12
SLC17A8Q8NDX2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SLC17A8Q8NDX2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
SLC17A8Q8NDX2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SLC17A8Q8NDX2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.29■■■□□ 2.12
SLC17A8Q8NDX2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SLC17A8Q8NDX2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.29■■■□□ 2.12
SLC17A8Q8NDX2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SLC17A8Q8NDX2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
SLC17A8Q8NDX2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.29■■■□□ 2.12
SLC17A8Q8NDX2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
SLC17A8Q8NDX2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.28■■■□□ 2.12
SLC17A8Q8NDX2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC28.28■■■□□ 2.12
SLC17A8Q8NDX2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
SLC17A8Q8NDX2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SLC17A8Q8NDX2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.28■■■□□ 2.12
SLC17A8Q8NDX2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.28■■■□□ 2.12
SLC17A8Q8NDX2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.28■■■□□ 2.12
SLC17A8Q8NDX2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SLC17A8Q8NDX2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SLC17A8Q8NDX2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SLC17A8Q8NDX2 AL451085.2-201ENST00000605085 799 ntBASIC28.27■■■□□ 2.12
SLC17A8Q8NDX2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SLC17A8Q8NDX2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.26■■■□□ 2.11
SLC17A8Q8NDX2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.26■■■□□ 2.11
SLC17A8Q8NDX2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SLC17A8Q8NDX2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC28.25■■■□□ 2.11
SLC17A8Q8NDX2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SLC17A8Q8NDX2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.23■■■□□ 2.11
SLC17A8Q8NDX2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SLC17A8Q8NDX2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.23■■■□□ 2.11
SLC17A8Q8NDX2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SLC17A8Q8NDX2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
SLC17A8Q8NDX2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.22■■■□□ 2.11
SLC17A8Q8NDX2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SLC17A8Q8NDX2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SLC17A8Q8NDX2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.22■■■□□ 2.11
SLC17A8Q8NDX2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.22■■■□□ 2.11
SLC17A8Q8NDX2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SLC17A8Q8NDX2 THA1P-201ENST00000590384 1145 ntBASIC28.21■■■□□ 2.11
SLC17A8Q8NDX2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SLC17A8Q8NDX2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SLC17A8Q8NDX2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.2■■■□□ 2.11
SLC17A8Q8NDX2 AC139426.1-201ENST00000568218 2529 ntBASIC28.2■■■□□ 2.1
SLC17A8Q8NDX2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SLC17A8Q8NDX2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
SLC17A8Q8NDX2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.19■■■□□ 2.1
SLC17A8Q8NDX2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.19■■■□□ 2.1
SLC17A8Q8NDX2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
SLC17A8Q8NDX2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SLC17A8Q8NDX2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SLC17A8Q8NDX2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SLC17A8Q8NDX2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SLC17A8Q8NDX2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SLC17A8Q8NDX2 KRT18P60-201ENST00000312876 1297 ntBASIC28.17■■■□□ 2.1
SLC17A8Q8NDX2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.17■■■□□ 2.1
SLC17A8Q8NDX2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SLC17A8Q8NDX2 AC100797.4-201ENST00000631653 1827 ntBASIC28.16■■■□□ 2.1
SLC17A8Q8NDX2 AC025884.2-201ENST00000553429 711 ntBASIC28.16■■■□□ 2.1
SLC17A8Q8NDX2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.16■■■□□ 2.1
SLC17A8Q8NDX2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
SLC17A8Q8NDX2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SLC17A8Q8NDX2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SLC17A8Q8NDX2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.15■■■□□ 2.1
SLC17A8Q8NDX2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.14■■■□□ 2.1
SLC17A8Q8NDX2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
SLC17A8Q8NDX2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
SLC17A8Q8NDX2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SLC17A8Q8NDX2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SLC17A8Q8NDX2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.11■■■□□ 2.09
SLC17A8Q8NDX2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.11■■■□□ 2.09
SLC17A8Q8NDX2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SLC17A8Q8NDX2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.11■■■□□ 2.09
SLC17A8Q8NDX2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.11■■■□□ 2.09
SLC17A8Q8NDX2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SLC17A8Q8NDX2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SLC17A8Q8NDX2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.1■■■□□ 2.09
SLC17A8Q8NDX2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SLC17A8Q8NDX2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
SLC17A8Q8NDX2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC28.09■■■□□ 2.09
SLC17A8Q8NDX2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.09■■■□□ 2.09
SLC17A8Q8NDX2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SLC17A8Q8NDX2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms