Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.09■□□□□ 0.97
ZNRF1Q8ND25 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.09■□□□□ 0.97
ZNRF1Q8ND25 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNRF1Q8ND25 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNRF1Q8ND25 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNRF1Q8ND25 CR559946.2-201ENST00000623684 991 ntBASIC21.08■□□□□ 0.97
ZNRF1Q8ND25 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNRF1Q8ND25 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNRF1Q8ND25 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNRF1Q8ND25 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNRF1Q8ND25 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNRF1Q8ND25 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNRF1Q8ND25 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNRF1Q8ND25 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.06■□□□□ 0.96
ZNRF1Q8ND25 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNRF1Q8ND25 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNRF1Q8ND25 MIR3648-2-201ENST00000581792 180 ntBASIC21.06■□□□□ 0.96
ZNRF1Q8ND25 MIR3648-1-201ENST00000615959 180 ntBASIC21.06■□□□□ 0.96
ZNRF1Q8ND25 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ZNRF1Q8ND25 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.06■□□□□ 0.96
ZNRF1Q8ND25 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNRF1Q8ND25 LINC01003-201ENST00000564834 1764 ntBASIC21.05■□□□□ 0.96
ZNRF1Q8ND25 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
ZNRF1Q8ND25 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ZNRF1Q8ND25 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNRF1Q8ND25 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ZNRF1Q8ND25 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNRF1Q8ND25 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNRF1Q8ND25 BX255925.1-201ENST00000566954 1854 ntBASIC21.04■□□□□ 0.96
ZNRF1Q8ND25 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ZNRF1Q8ND25 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNRF1Q8ND25 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ZNRF1Q8ND25 AC016575.1-201ENST00000607026 382 ntBASIC21.03■□□□□ 0.96
ZNRF1Q8ND25 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ZNRF1Q8ND25 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.03■□□□□ 0.96
ZNRF1Q8ND25 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNRF1Q8ND25 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNRF1Q8ND25 AC018358.1-201ENST00000631079 1402 ntBASIC21.02■□□□□ 0.96
ZNRF1Q8ND25 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNRF1Q8ND25 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNRF1Q8ND25 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNRF1Q8ND25 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNRF1Q8ND25 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNRF1Q8ND25 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ZNRF1Q8ND25 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.99■□□□□ 0.95
ZNRF1Q8ND25 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
ZNRF1Q8ND25 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNRF1Q8ND25 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.98■□□□□ 0.95
ZNRF1Q8ND25 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNRF1Q8ND25 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ZNRF1Q8ND25 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNRF1Q8ND25 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNRF1Q8ND25 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNRF1Q8ND25 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNRF1Q8ND25 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNRF1Q8ND25 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNRF1Q8ND25 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNRF1Q8ND25 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNRF1Q8ND25 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ZNRF1Q8ND25 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNRF1Q8ND25 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNRF1Q8ND25 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.95■□□□□ 0.94
ZNRF1Q8ND25 AC008813.1-201ENST00000536597 885 ntBASIC20.95■□□□□ 0.94
ZNRF1Q8ND25 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNRF1Q8ND25 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNRF1Q8ND25 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNRF1Q8ND25 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNRF1Q8ND25 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ZNRF1Q8ND25 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNRF1Q8ND25 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNRF1Q8ND25 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZNRF1Q8ND25 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNRF1Q8ND25 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.93■□□□□ 0.94
ZNRF1Q8ND25 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNRF1Q8ND25 HLA-V-202ENST00000446817 847 ntBASIC20.92■□□□□ 0.94
ZNRF1Q8ND25 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNRF1Q8ND25 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ZNRF1Q8ND25 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
ZNRF1Q8ND25 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNRF1Q8ND25 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ZNRF1Q8ND25 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNRF1Q8ND25 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNRF1Q8ND25 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ZNRF1Q8ND25 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNRF1Q8ND25 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNRF1Q8ND25 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNRF1Q8ND25 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ZNRF1Q8ND25 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNRF1Q8ND25 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNRF1Q8ND25 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNRF1Q8ND25 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.89■□□□□ 0.93
ZNRF1Q8ND25 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNRF1Q8ND25 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.88■□□□□ 0.93
ZNRF1Q8ND25 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZNRF1Q8ND25 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.88■□□□□ 0.93
ZNRF1Q8ND25 MIR219A2-201ENST00000608502 1504 ntBASIC20.88■□□□□ 0.93
ZNRF1Q8ND25 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.87■□□□□ 0.93
ZNRF1Q8ND25 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.87■□□□□ 0.93
ZNRF1Q8ND25 MIR639-201ENST00000384974 98 ntBASIC20.87■□□□□ 0.93
ZNRF1Q8ND25 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms